Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20]
1,991 sequences; 235,376,169 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1769 105 6e-18
seq1795 89.7 5e-13
>seq1769
Length=991018
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || || ||||||||| ||||||| | ||| | ||| | |
Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || || || ||||||||||| || || || ||||||
Sbjct 745783 GACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAA 745842
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || |||| | ||||| || | ||||||| |||| | |||| || || |||
Sbjct 745843 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAAC 745902
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986
|| || || ||||| ||| | || || ||| | |||||
Sbjct 745903 ATCCAGAAGGAATCAACTCTTCACCTTGTCTTAAGACT 745940
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || ||||| || | || || || | |||||| | || | || | |
Sbjct 743443 ATGCAAATTTTCGTAAAGACGCTTACCGGCAAGACTATCACCTTAGAGGTGGAGCCGAGT 743502
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| |||| ||| | || ||| | |||||| |||||||| || || || || ||||||
Sbjct 743503 GATTCCATTGAGAATGTGAAAAACAAGATTCAAGACAAAGAGGGTATCCCCCCGGATCAA 743562
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | |||| | ||||| || || ||||||| |||| | |||| ||||| ||
Sbjct 743563 CAGCGTTTAATTTTTGCTGGCAAGCAGCTGGAAGATGGCAGAACCCTCAGTGACTACAAT 743622
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
|| || ||||||||||| | ||| ||||||| |||
Sbjct 743623 ATCCAGAAAGAATCTACACTTCATTTGGTCCTCAGA 743658
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| || ||||| || | || || | ||| | ||| ||| |
Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || ||| || || |||||||| || ||||| |||||
Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| | || ||||| | ||||||| ||||| |||| || || |||
Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
|| ||||||||||| || | || |||| || |||
Sbjct 745675 ATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAGA 745710
>seq1795
Length=846455
Score = 89.7 bits (98), Expect = 5e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929
||| || ||||| ||||||||||||||||| | | ||| ||||| | ||||||| |||
Sbjct 394747 AGGTATTCCTCCTGATCAACAAAGACTCATCTTTGCCGGAAAACAGTTGGAAGATGGTAG 394806
Query 26930 AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAG 26989
|| | || ||||| || || |||||||| || || ||||||| || || || | ||
Sbjct 394807 AACATTGAGTGACTACAATATACAAAAAGAGTCAACCCTCCATCTTGTTCTAAGGTTGAG 394866
Query 26990 AGGAGGA 26996
||| |||
Sbjct 394867 AGGCGGA 394873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478650487289520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |