Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1769 120 3e-22 >seq1769 Length=991018 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| | || || || || ||||| ||||| || | ||| Sbjct 744583 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 744642 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || |||||| |||||||||||| | || |||||| Sbjct 744643 GACACCATT-GACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 744701 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || |||| ||| ||||| || |||||||||| | |||| | ||||| || Sbjct 744702 ACAGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAA 744761 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || ||||| || || | ||| |||| | ||||||||||| || Sbjct 744762 CATCCAGAAAGAATCAACACTTCATTTGGTTCTCAGATTGCGAGGTGG 744809 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| | || || || || ||||| | ||| || | ||| Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | ||||| || || |||||| |||||||||||| | || |||||| Sbjct 745327 GACACT-ATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 745385 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || |||| ||| ||||| || |||||||||| | |||| | ||||| || Sbjct 745386 GCAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAA 745445 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || || | || |||| | |||||||| || || Sbjct 745446 CATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745493 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| | || || ||||| ||||| | ||| || | || Sbjct 743899 ATGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGT 743958 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || || ||||| || ||| ||||||| ||||||||||| | || ||||| Sbjct 743959 GATACCATT-GACAATGTCAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCAGATCA 744017 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||||| |||| ||| ||||| || || || |||| | ||| || ||||| || Sbjct 744018 GCAAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTACAA 744077 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||| || | ||| |||| | ||| |||| || || Sbjct 744078 TATTCAGAAGGAGTCAACACTTCATTTGGTTCTCAGACTGCGTGGTGG 744125 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| | || || || || ||||| ||||| || | ||| Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | ||||| || || |||||| |||||||||||| | || |||||| Sbjct 745099 GACACT-ATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 745157 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | |||| ||| ||||| || || ||||||| | |||| | ||||| || Sbjct 745158 GCAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAA 745217 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || || | || |||| | |||||||| || || Sbjct 745218 CATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745265 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| | || || || || ||||| | ||| || | ||| Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || |||||| |||||||||||| | || |||||| Sbjct 745555 GACACCATT-GACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 745613 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | |||| ||| || ||||| |||||||||| | ||| | ||||| || Sbjct 745614 GCAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAA 745673 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || || | || |||| | |||||||| || || Sbjct 745674 CATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745721 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || ||||| | || |||||||| || || | ||| ||| |||| Sbjct 743671 ATGCAAATTTTCGTAAAAACCTTGACCGGAAAAACAATAACACTGGAAGTTGAGCCCAGT 743730 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || || || ||||| ||||| | || ||||| Sbjct 743731 GACACTATT-GACAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCA 743789 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| |||||||| ||||| |||| || |||| | ||||| || Sbjct 743790 ACAACGCTTGATTTTTGCTGGCAAACAGTTAGAGGATGGCAGAACCCTTAGTGATTACAA 743849 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || || | ||| |||| | ||||| || || || Sbjct 743850 CATCCAAAAGGAATCAACACTTCATTTGGTTCTCAGATTACGTGGTGG 743897 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||||||||| | || || ||||| || || ||||| || |||| Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || | | | || ||| ||||||| |||||||| || | || || || Sbjct 744415 GATACCATAGATAATGTCAAAGCAAAAATTCAAGATAAAGAGGGTATTCCACCAGACCAA 744474 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || |||| ||| || ||||| |||||||||| | |||| | ||||| ||| Sbjct 744475 CAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744534 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| || || || | || |||| | |||||||| || || Sbjct 744535 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 744581 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| || || || || || ||||| | ||| ||| | || Sbjct 744127 ATGCAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGAGCCAAGT 744186 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | |||| || ||| ||||| ||||| ||||| | || ||||| Sbjct 744187 GACACTATAG-ACAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATTCCACCAGATCA 744245 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| ||| ||||||||||| ||||||| || |||| | || || || Sbjct 744246 ACAACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTACAA 744305 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || || || | || |||| | || ||||| || || Sbjct 744306 CATCCAAAAGGAATCAACACTTCACTTGGTTCTCAGGTTGCGTGGTGG 744353 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| | || || ||||| ||||| | ||| || |||| Sbjct 744811 ATGCAGATTTTTGTCAAAACTTTGACTGGGAAAACAATTACACTTGAAGTTGAACCCAGT 744870 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || || || ||||| ||||| | || |||||| Sbjct 744871 GACACCATTGATAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAG 744930 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| || ||||| |||||||||| | ||| | ||||| ||| Sbjct 744931 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 744990 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || ||||| || || | || |||| | |||||||| || || Sbjct 744991 ATCCAGAAAGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745037 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || | || |||||||| || || | ||| || |||| Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || ||||| || |||||||| | || ||||| Sbjct 745783 GACACCATT-GACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCA 745841 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || |||| ||| ||||| || || ||||||| || |||| | ||||| || Sbjct 745842 ACAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAA 745901 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || || || || ||| | || | || || ||| |||| || || Sbjct 745902 CATCCAGAAGGAATCAACTCTTCACCTTGTCTTAAGACTGCGCGGTGG 745949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425333678894920