Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1769 109 4e-19 >seq1769 Length=991018 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || ||||| || |||||||| || | |||| || | || ||||| || Sbjct 745925 TGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGC 745866 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| |||| || |||||||| || || | || |||||||| |||| | Sbjct 745865 TTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 745806 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||||| | ||| || ||||| ||||| |||||||| ||| Sbjct 745805 GCCTTCACATTGTCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTC 745746 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||||||||||||| Sbjct 745745 AAGGTCTTGACAAAAATCTGCAT 745723 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || |||| || || |||| ||| || || || |||||||| |||||||| || Sbjct 743897 CCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTA 743838 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | ||||| || |||||||| ||| |||| | || ||||| || ||| Sbjct 743837 AGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGA 743778 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || || ||| || | | | | |||||| | |||||| Sbjct 743777 ATACCTTCCTTATCTTGGATCTTGGC--CTTGACATTGTCAATAGTGTCACTGGGCTCAA 743720 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || ||||||||||||| ||||| || ||||| ||||| Sbjct 743719 CTTCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || | ||| || |||| || || || || |||||||| ||||||||||| Sbjct 744353 CCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTG 744294 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | || |||||||||||||| ||| |||| | || ||||| || || Sbjct 744293 AGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGA 744234 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || ||| ||||| | | | | |||||| | ||||| Sbjct 744233 ATACCTTCCTTATCTTGGATTTTGGCT--TTCACATTGTCTATAGTGTCACTTGGCTCTA 744176 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || || || || |||||||| ||||||||||| Sbjct 744175 CTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| | || || |||| ||| || || || || || || |||||||| || Sbjct 744809 CCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTG 744750 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | || || || || ||||| ||| |||| || |||||||| || ||| Sbjct 744749 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGA 744690 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| ||||| || || ||||| |||||| | | | | ||||||| || || Sbjct 744689 ATGCCTTCTTTATCCTGGATTTTTGC--CTTCACATTGTCAATGGTGTCGCTTGGTTCAA 744632 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || || || || |||| |||||||||||||||||||| Sbjct 744631 CTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| || || || || |||||||| |||||||| || | |||| | | Sbjct 745253 CTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCA 745194 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||| || ||||| ||| |||| | || || || || ||| | ||| ||||| Sbjct 745193 TCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTA 745134 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || ||||| |||||| | | | | |||||||| || || ||| | || | Sbjct 745133 TCCTGGATTTTTGC--CTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAA 745076 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || |||| |||||||||||||||||||| Sbjct 745075 TAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| || || || || |||||||| |||||||| || | |||| | | Sbjct 745481 CTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCA 745422 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || || || ||||| ||| |||| || || || || || ||| | ||| ||||| Sbjct 745421 TCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTA 745362 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || ||||| |||||| | | | | |||||||| || || ||| | || | Sbjct 745361 TCCTGGATTTTTGC--CTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAA 745304 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || |||| |||||||||||||||||||| Sbjct 745303 TAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| || || || || |||||||| |||||||| || | |||| | | Sbjct 744569 CTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCA 744510 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || || || ||||| || ||| |||| || ||||||||||| || | |||||||| Sbjct 744509 TCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTA 744450 Query 16841 TCGGCAATTTGCTGC-TTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 || ||||| ||| || || | | | || || | ||| || ||| | ||||| Sbjct 744449 TCTTGAATTT-TTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGAT 744391 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || |||| |||||||||||||| ||||| Sbjct 744390 TGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 ||||| || || | || || |||| ||| || || || || || || || |||||||| Sbjct 743671 TACCC-CCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCA 743613 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 | |||| || | || |||| || ||||| ||| |||| | |||||||| ||| Sbjct 743612 CTGAGGGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGG 743553 Query 16826 GGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 || | ||||||||||| ||| | | ||||| | | | | || | |||||| Sbjct 743552 GGGATACCCTCTTTGTCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCC 743493 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || ||||| ||||| || || ||||| ||||| Sbjct 743492 ACCTCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405078170413090