Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20]
1,991 sequences; 235,376,169 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1769 136 3e-27
>seq1769
Length=991018
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || ||||| || ||| | |||||| ||||||| || | |
Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || || |||| ||||||||| ||| || ||||| || |||||||| ||
Sbjct 744415 GATACCATAGATAATGTCA---AAGCAAAAATTCAA-GATAAAGAGGGTATTCCACCAGA 744470
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||||| | |||||||| || ||||| |||||||||| | | || | | |||||
Sbjct 744471 CCAACAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTA 744530
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
||| || ||||| ||||| || || || || || || ||
Sbjct 744531 CAACATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAG 744569
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || ||||| || || | || ||| ||||||| || |
Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| ||||| ||||||| || |||||||| ||||| ||||| ||
Sbjct 745099 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745158
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||| ||||| || || ||||||| | | || | | ||||||||
Sbjct 745159 CAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAAC 745218
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
|| ||||| ||||| || || || || || || ||
Sbjct 745219 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAG 745253
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || ||||| || || | || ||| | ||||| || |
Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| ||||| ||||||| || |||||||| ||||| ||||| ||
Sbjct 745327 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745386
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||| ||||| || |||||||||| | | || | | ||||||||
Sbjct 745387 CAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 745446
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
|| ||||| ||||| || || || || || || ||
Sbjct 745447 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAG 745481
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||| || ||| | ||||| | ||||| || | |
Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| |||||| ||||||||||| |||||||| || |||
Sbjct 745783 GACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAA 745842
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | |||||||| ||||| || || ||||||| | || | | ||||||||
Sbjct 745843 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAAC 745902
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || ||||| || || ||
Sbjct 745903 ATCCAGAAGGAATCAACTCTTCA 745925
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || ||||| || || | || ||| | ||||| || |
Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| ||||||| || |||||||| ||||| ||||| ||
Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||| || ||||| |||||||||| | | || | | ||||||||
Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
|| ||||||||||| || || || || || || ||
Sbjct 745675 ATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAG 745709
Score = 111 bits (122), Expect = 1e-19
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || ||||| || ||| | || || | ||||| || | |
Sbjct 743899 ATGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGT 743958
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || || || || ||||||||| ||| || |||||||| |||||||| ||
Sbjct 743959 GATACCATTGA--CAATGTCAAAGCAAAAATTCAA-GATAAAGAAGGTATTCCACCAGAT 744015
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || | | |||||||| ||||| || || || |||| | | || || | ||||||
Sbjct 744016 CAGCAAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTAC 744075
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
|||||||| || || || || || ||||| || || || ||
Sbjct 744076 AATATTCAGAAGGAGTCAACACTTCATTTGGTTCTCAGACT 744116
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | || || || | || ||| | ||||| ||| | |
Sbjct 744127 ATGCAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGAGCCAAGT 744186
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || |||| |||| || || || ||||| |||||||| ||
Sbjct 744187 GACACTATAGA--CAATGTGAAAGCCAAAATCCAA-GATAAGGAAGGTATTCCACCAGAT 744243
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | |||||||| ||||||||||| ||||||| | || | | || |||
Sbjct 744244 CAACAACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTAC 744303
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214
|| || ||||| ||||| || || || || || || |||
Sbjct 744304 AACATCCAAAAGGAATCAACACTTCACTTGGTTCTCAGG 744342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433317485160665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |