Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1769 136 3e-27 >seq1769 Length=991018 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| || ||| | |||||| ||||||| || | | Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| ||||||||| ||| || ||||| || |||||||| || Sbjct 744415 GATACCATAGATAATGTCA---AAGCAAAAATTCAA-GATAAAGAGGGTATTCCACCAGA 744470 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | |||||||| || ||||| |||||||||| | | || | | ||||| Sbjct 744471 CCAACAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTA 744530 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 ||| || ||||| ||||| || || || || || || || Sbjct 744531 CAACATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAG 744569 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||| || || | || ||| ||||||| || | Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| ||||||| || |||||||| ||||| ||||| || Sbjct 745099 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745158 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| ||||| || || ||||||| | | || | | |||||||| Sbjct 745159 CAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAAC 745218 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 || ||||| ||||| || || || || || || || Sbjct 745219 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAG 745253 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||| || || | || ||| | ||||| || | Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| ||||||| || |||||||| ||||| ||||| || Sbjct 745327 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745386 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| ||||| || |||||||||| | | || | | |||||||| Sbjct 745387 CAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 745446 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 || ||||| ||||| || || || || || || || Sbjct 745447 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAG 745481 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| | ||||| | ||||| || | | Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| |||||| ||||||||||| |||||||| || ||| Sbjct 745783 GACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAA 745842 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| ||||| || || ||||||| | || | | |||||||| Sbjct 745843 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAAC 745902 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| || || || Sbjct 745903 ATCCAGAAGGAATCAACTCTTCA 745925 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||| || || | || ||| | ||||| || | Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| ||||||| || |||||||| ||||| ||||| || Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| || ||||| |||||||||| | | || | | |||||||| Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213 || ||||||||||| || || || || || || || Sbjct 745675 ATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAG 745709 Score = 111 bits (122), Expect = 1e-19 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| || ||| | || || | ||||| || | | Sbjct 743899 ATGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGT 743958 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || ||||||||| ||| || |||||||| |||||||| || Sbjct 743959 GATACCATTGA--CAATGTCAAAGCAAAAATTCAA-GATAAAGAAGGTATTCCACCAGAT 744015 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || | | |||||||| ||||| || || || |||| | | || || | |||||| Sbjct 744016 CAGCAAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTAC 744075 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| || || || || || ||||| || || || || Sbjct 744076 AATATTCAGAAGGAGTCAACACTTCATTTGGTTCTCAGACT 744116 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | || ||| | ||||| ||| | | Sbjct 744127 ATGCAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGAGCCAAGT 744186 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || |||| |||| || || || ||||| |||||||| || Sbjct 744187 GACACTATAGA--CAATGTGAAAGCCAAAATCCAA-GATAAGGAAGGTATTCCACCAGAT 744243 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | |||||||| ||||||||||| ||||||| | || | | || ||| Sbjct 744244 CAACAACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTAC 744303 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGG 25214 || || ||||| ||||| || || || || || || ||| Sbjct 744304 AACATCCAAAAGGAATCAACACTTCACTTGGTTCTCAGG 744342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317485160665