Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1829 109 6e-19 >seq1829 Length=5883334 Score = 109 bits (120), Expect = 6e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 93128 ATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATT 93187 |||| |||||||||||| |||| ||| || | || ||| |||||||| | ||||||||| Sbjct 4218259 ATCAGCTCATTGCTGAACGTTAGACCGGGCATCACTCCACGTTTCTTCAACCAAAATATA 4218318 Query 93188 GAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCAC 93237 || |||||| || |||||||| || ||||| || |||||||||||||| Sbjct 4218319 GATGCAAAAGATCCTGAAAAAAAGATTCCTTCGACAGCTGCAAATGCCAC 4218368 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 93476 ACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATA 93535 || ||||||||||| || || ||||| || ||||| || ||||| | ||| |||| | Sbjct 4220055 ACCAGATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAAACATGTTTTACA 4220114 Query 93536 AAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACT 93595 ||||| |||||||||| || | ||| | |||||| | | || || || | ||| ||| Sbjct 4220115 AAATGCTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTAGACATATCAACT 4220174 Query 93596 TCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATAT 93655 ||||| ||||| || || ||||| || | ||||| | ||| ||||| || | | Sbjct 4220175 TCTTCCGTCGTCCAGAAGGACGCTTCGGCCATCTTGTAAAACCTCCAGATGTCCTGGTGT 4220234 Query 93656 TGAATTGGAAATATGACAAAACGATTAGGGTTA 93688 | || ||||| || ||||| | ||||||| Sbjct 4220235 TTTATCGGAAAAATAACAAACCTCCGAGGGTTA 4220267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556846941126840