Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1769 138 1e-27 >seq1769 Length=991018 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| |||| |||||||| ||||| ||||| ||||| || Sbjct 743899 ATGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGT 743958 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | | || ||| ||||||| || |||||||| |||| ||||| Sbjct 743959 GATACCATTGACAATGTCAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAG 744018 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| || |||| ||| ||||| || ||||| ||| || ||| || ||||| ||| Sbjct 744019 CAAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTACAAT 744078 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || || || ||||| ||||| || | | ||||| ||||||| Sbjct 744079 ATTCAGAAGGAGTCAACACTTCATTTGGTTCTCAGACTGCGTGGTGGCA 744127 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||||||||| |||| || || || ||||| | ||| ||||| ||| Sbjct 744583 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 744642 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | | || || |||||| || ||||||||| |||| |||||| Sbjct 744643 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAA 744702 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| ||||| || || |||||| || ||| | ||||| || Sbjct 744703 CAGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744762 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || |||||||| ||||| ||||| || | | |||| ||||| Sbjct 744763 ATCCAGAAAGAATCAACACTTCATTTGGTTCTCAGATTGCGAGGTGG 744809 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||||||||| |||| |||||||| || || | ||| |||||||| Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | || ||| ||||||| || ||||| || |||| || ||| Sbjct 744415 GATACCATAGATAATGTCAAAGCAAAAATTCAAGATAAAGAGGGTATTCCACCAGACCAA 744474 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| || ||||| || |||||| || ||| | ||||| || Sbjct 744475 CAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744534 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || ||||| ||||| || || || || || | | |||| ||||||| Sbjct 744535 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGGCA 744583 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||||||||| |||| || || || ||||| | ||| ||||| ||| Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || | | | | || || |||||| || ||||||||| |||| ||||| Sbjct 745327 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745386 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| ||| ||||| || || |||||| || ||| | ||||| || Sbjct 745387 CAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 745446 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || ||||| ||||| || || || || || | | |||| ||||||| Sbjct 745447 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGGCA 745495 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || || ||| | |||||||| || || ||| | || ||| || || Sbjct 743443 ATGCAAATTTTCGTAAAGACGCTTACCGGCAAGACTATCACCTTAGAGGTGGAGCCGAGT 743502 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||||| ||| | || ||| | || ||| |||||||| || | ||| |||||| Sbjct 743503 GATTCCATTGAGAATGTGAAAAACAAGATTCAAGACAAAGAGGGTATCCCCCCGGATCAA 743562 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | | |||| ||| ||||| || |||||||| | ||| | || || ||| Sbjct 743563 CAGCGTTTAATTTTTGCTGGCAAGCAGCTGGAAGATGGCAGAACCCTCAGTGACTACAAT 743622 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || || |||||||||||||| ||||| || Sbjct 743623 ATCCAGAAAGAATCTACACTTCATTTGGT 743651 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||||||||| |||| || || || ||||| | ||| ||||| ||| Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || | | | | || || |||||| || ||||||||| |||| ||||| Sbjct 745099 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745158 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| ||||| || ||||||||| || ||| | ||||| || Sbjct 745159 CAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAAC 745218 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || || || || || | | |||| ||||| Sbjct 745219 ATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745265 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||||||||| |||| || || || ||||| | ||| ||||| ||| Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | | || || |||||| || ||||||||| |||| ||||| Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| || ||||| || |||||| || ||| | ||||| || Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||| || || || || || | | |||| ||||| Sbjct 745675 ATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745721 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||||||||| || |||| || ||||| || || ||||| |||||||| Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | | || || ||||| ||||||||||| |||| |||||| Sbjct 745783 GACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAA 745842 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| ||||| || ||||||||| | ||| | ||||| || Sbjct 745843 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAAC 745902 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || | || || | ||||||||||| Sbjct 745903 ATCCAGAAGGAATCAACTCTTCACCTTGTCTTAAGACTGCGCGGTGG 745949 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || ||||| ||||||| ||||| || || ||||| || ||||| Sbjct 743671 ATGCAAATTTTCGTAAAAACCTTGACCGGAAAAACAATAACACTGGAAGTTGAGCCCAGT 743730 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || || || || || ||||| |||| |||||| Sbjct 743731 GACACTATTGACAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 743790 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| |||||||| || || ||| | ||| | ||||| || Sbjct 743791 CAACGCTTGATTTTTGCTGGCAAACAGTTAGAGGATGGCAGAACCCTTAGTGATTACAAC 743850 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || ||||| ||||| ||||| ||||| || Sbjct 743851 ATCCAAAAGGAATCAACACTTCATTTGGT 743879 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| |||||||| | || || || || ||||| ||||| || || || Sbjct 744127 ATGCAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGAGCCAAGT 744186 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || | | | | || ||| ||||| || || ||||| |||| |||||| Sbjct 744187 GACACTATAGACAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 744246 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| |||||||||||||||||| | ||| | || || || Sbjct 744247 CAACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTACAAC 744306 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| ||||| || || || | | |||| ||||| Sbjct 744307 ATCCAAAAGGAATCAACACTTCACTTGGTTCTCAGGTTGCGTGGTGG 744353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423029734802200