Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1054 98.7 1e-15 seq933 86.0 7e-12 seq1769 84.2 2e-11 seq1020 84.2 2e-11 >seq1054 Length=2124587 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/106 (81%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 56973 AGTTAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGG 57032 |||||| || |||| || ||| | ||||| | ||||| || | | ||| |||||| || Sbjct 832474 AGTTAA-AATAAATAAAGTTTTCTAAAAAAATATCTCCCCGTCGGGGAATTGAACCCCGG 832416 Query 57033 TCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 ||||||||||||||||||| ||||| |||||||||||| |||||| Sbjct 832415 TCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTAACGAGGA 832370 >seq933 Length=2349635 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 183607 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 183666 Query 57066 ATACTACCGAGGA-TTGAA 57083 |||||| |||||| ||||| Sbjct 183667 ATACTAACGAGGACTTGAA 183685 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||||||| | ||| || | ||||| |||||| ||||||||||||||||||||| ||| Sbjct 184225 AAAAATTGACCTCCCCGTCGGGAAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 184284 Query 57057 CTCACCACTATACTACCGAGGA 57078 || |||||||||||| |||||| Sbjct 184285 CTTACCACTATACTAACGAGGA 184306 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| |||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 359682 AAAAATAACCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 359741 Query 57058 TCACCACTATACTACCGAGGA 57078 | |||||||||||| |||||| Sbjct 359742 TTACCACTATACTAACGAGGA 359762 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 186373 TCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 186432 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 186433 ATACTAACGAGGA 186445 >seq1769 Length=991018 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||| ||||||||||||||| || || | | || || Sbjct 744107 ACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCATCCTCC 744048 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | |||||| ||||| || || |||| ||||| || | ||| | | || ||| | || Sbjct 744047 AACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATAC-CTTCTTTATCTTG 743989 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | |||||| ||||| | | | || || || | ||| || || | || || ||||| Sbjct 743988 AATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTTTT 743929 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | || || ||||| |||||||| Sbjct 743928 GCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 >seq1020 Length=2255758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1623656 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1623715 Query 57067 TACTACCGAGGA-TTGAATAT 57086 ||||| |||||| ||||| || Sbjct 1623716 TACTAACGAGGACTTGAAAAT 1623736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543199280791440