Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1769 104 2e-17 >seq1769 Length=991018 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| | | ||| || || | | |||| |||||||| |||||||| || || Sbjct 744582 GCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACT 744523 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || || | |||||||| | | | || |||||||||||||| || || Sbjct 744522 GAGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGG 744463 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| ||||| || ||| |||||| ||| | | || | ||| || | | || | Sbjct 744462 AATACCCTCTTTATC-TTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAA 744404 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | ||||| ||||||| ||||| |||||||| ||||| Sbjct 744403 CTTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | | ||| || || | |||| |||||||| ||||||||||| || Sbjct 744353 CCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTG 744294 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || | |||||| || | | | |||| ||| ||||| || || || Sbjct 744293 AGGGTTCTGCCA-TCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGG 744235 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || |||||| ||| | ||||| | | ||||| | | ||| | Sbjct 744234 AATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGT-CTATAGTGTCACTTGGCTCTA 744176 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | || | || | || || ||||| || ||||| || |||||||||||| Sbjct 744175 CTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCATG 744126 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||||||| | | ||| ||||| | |||| || || || |||||||| || || Sbjct 744809 CCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTG 744750 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | || || || | | | || ||||||||||| || ||||| Sbjct 744749 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGA 744690 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||||||| || | ||||| | | ||||||| | | || || Sbjct 744689 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGT-CAATGGTGTCGCTTGGTTCAAC 744631 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | || || || |||| ||||| ||||||||||||||| Sbjct 744630 TTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCATG 744582 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| | | ||| || || | | |||| || ||||| |||||||| || || Sbjct 745721 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTG 745662 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | |||||||| | | | || | ||| || || || ||||| Sbjct 745661 AGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGA 745602 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||||||| || | ||||| | | ||||||| | | || || Sbjct 745601 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGT-CAATGGTGTCGCTTGGTTCAAC 745543 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || ||||||| ||||| ||||||||||||||| Sbjct 745542 TTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCATG 745494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCG 138477 |||| ||||| || |||||||| || || | || | || | || || | || || || Sbjct 745918 TTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCA-TCTTCCAACTGCTTGCCA 745860 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 | | | || ||||||||||| || || || |||||||||||||| |||||| || Sbjct 745859 GCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGCCTTC 745800 Query 138538 A-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||||| | | |||||| | | || || || | || | |||||| ||||||| || Sbjct 745799 ACATTGT-CAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTCAAGGT 745741 Query 138597 TTTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 745740 CTTGACAAAAATCTGCAT 745723 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| | | ||| || || | | |||| |||||||| |||||||| || || Sbjct 745494 GCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACT 745435 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || || | || || || | | | || ||||| || || || ||||| Sbjct 745434 GAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGG 745375 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||||||| || ||||||| || | ||||| | | |||||| | | || | Sbjct 745374 AATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGT-CGATAGTGTCGCTTGGTTCAA 745316 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || || ||||||| ||||| |||||||||||||| Sbjct 745315 CTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250049269520