Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1769 141 8e-29 >seq1769 Length=991018 Score = 141 bits (156), Expect = 8e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || ||||| |||| |||| || ||| || || ||| Sbjct 744557 TGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGT 744498 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | |||| || || ||||| || ||||| || |||||||||||||||||| Sbjct 744497 TTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTT 744438 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 ||||| |||| ||| || | || |||||||| || | |||||||| || Sbjct 744437 GCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTC 744378 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||| |||||||||||||| Sbjct 744377 AAGGTTTTGACAAAAATTTGCAT 744355 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | || | ||| || ||||| ||||| || ||||| ||||| Sbjct 744128 ATGCCACCACGCAGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCA 744069 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| || ||| ||||| || || || || | |||| || |||||| || || Sbjct 744068 CTCAATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGT 744009 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||||||||||||| ||||| || | ||| || | || Sbjct 744008 GGAATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCA 743949 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||||| |||||||| || | ||||| |||||||||||||| Sbjct 743948 ACTTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || ||||| |||| |||| || ||| ||||| || Sbjct 745241 TGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCCAACTGC 745182 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||| |||||||| || || ||||||||||||||||| || |||||| Sbjct 745181 TTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTT 745122 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | |||||| | || |||||||| |||| || || || || Sbjct 745121 GCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTC 745062 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||| |||||||| ||||| Sbjct 745061 AAGGTTTTGACAAAAATCTGCAT 745039 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || |||||||| |||||||| || ||||| |||| ||| || ||| || || ||| Sbjct 745697 TGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGT 745638 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||| |||||||| || || ||||||||||||||||| || |||||| Sbjct 745637 TTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTT 745578 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | ||||||| | || ||||| || |||| || || || || Sbjct 745577 GCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTC 745518 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||| |||||||| ||||| Sbjct 745517 AAGGTTTTGACAAAAATCTGCAT 745495 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || ||||| |||| |||| || ||| || || || Sbjct 745469 TGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGC 745410 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | |||| |||||||| || || ||||||||||||||||| || |||||| Sbjct 745409 TTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTT 745350 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | |||||| | || ||||| || |||| || || || || Sbjct 745349 GCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTC 745290 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||| |||||||| ||||| Sbjct 745289 AAGGTTTTGACAAAAATCTGCAT 745267 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || ||||||||||||||||| || ||||| || | |||| | ||| || || || Sbjct 743874 ATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCCATCCTCTAACTG 743815 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || || | ||||| ||||| || || || ||||| ||||| |||||||| || || Sbjct 743814 TTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATCTT 743755 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | ||||| | ||| ||||| || || | ||||| ||||| Sbjct 743754 GGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATTGTTTTTCCGGT 743695 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | |||||||| ||||||||||| Sbjct 743694 CAAGGTTTTTACGAAAATTTGCAT 743671 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || || || |||| |||| | ||| ||||||||| Sbjct 744329 TGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCATCTTCCAATTGT 744270 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || || ||||| || || || ||||| ||||| |||||||| ||||| Sbjct 744269 TTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTTTG 744210 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 ||| | |||| ||||| | ||| ||||| | |||| || || || || Sbjct 744209 GCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAATTGTCTTCCCAGTA 744150 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || ||||| ||||| Sbjct 744149 AGTGTTTTGACGAAAATCTGCAT 744127 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || |||||||| || ||||| || ||||| |||| |||| || ||| || || || Sbjct 744786 ATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTG 744727 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || || | |||| || || || || || ||||||||||||||||| || ||||| Sbjct 744726 CTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTT 744667 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | || | || | ||||||| | || |||||||| |||| || || || || Sbjct 744666 TGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGT 744607 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| |||||||| ||||| Sbjct 744606 CAAGGTTTTGACAAAAATCTGCAT 744583 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || || || || || || || ||||||||||| ||||| || ||||| ||| Sbjct 745949 CCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTG 745890 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| | ||| ||||| || || || || | |||| || || || || || ||| Sbjct 745889 AGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGA 745830 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || |||||||| || || ||||| || | || | |||||| | || ||| Sbjct 745829 ATACCTTCTTTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTCACTGGGTTCAACT 745770 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||| | |||||| || || | || || |||||||| ||||| Sbjct 745769 TCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 745723 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || || ||||| || |||||||| || || |||| |||| | ||| |||| || Sbjct 743646 ATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCTTCCAGCTG 743587 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || || | || || || || || ||||| || || || ||||| |||||||| || Sbjct 743586 CTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGAATCTT 743527 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | ||| | || | || || | ||| || || | || | || |||||||| Sbjct 743526 GTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTCTTGCCGGT 743467 Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||| |||||||||||| Sbjct 743466 AAGCGTCTTTACGAAAATTTGCATC 743442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451991950770360