Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1769 147 5e-30 seq1795 89.7 1e-12 >seq1769 Length=991018 Score = 147 bits (162), Expect = 5e-30 Identities = 166/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | ||||| || ||||| || |||||||||||||| | ||||| Sbjct 744116 AGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTA 744057 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | |||||| || || || || |||| ||| || ||||| ||||| |||||| Sbjct 744056 CCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCT 743997 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 || |||||||||||| ||||| || |||||||| || ||| ||| ||||| || Sbjct 743996 TTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATC---ACTTGGTTCAACTTCCAGA 743940 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || || ||||| ||||| || || | |||||| Sbjct 743939 GTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | ||||| || || ||||| || || |||||||| || ||||| || Sbjct 744798 TCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACC 744739 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | |||||| || || || || || || ||||| || ||||||||||||||||| Sbjct 744738 ATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTT 744679 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 || || |||||| ||| || || ||||||||||| ||| ||||| || |||| Sbjct 744678 ATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAAT 744619 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| |||||||| ||||| || || | ||||| Sbjct 744618 AGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | |||||| || || |||||||| || |||||||| || ||||| || Sbjct 745710 TCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACC 745651 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | ||| ||||| || || || | ||||| || || ||||||||||||||||| Sbjct 745650 ATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTT 745591 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 || || |||||| ||| || || ||||||||||| ||| ||||| || |||| Sbjct 745590 ATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAAT 745531 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| ||||| || || | ||||| Sbjct 745530 AGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 147 bits (162), Expect = 5e-30 Identities = 166/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| || |||||||||||||| || || || || || |||||||| || ||||| Sbjct 745940 AGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTG 745881 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | |||||| || || || || || || ||||| ||||| ||||| |||||| Sbjct 745880 CCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCT 745821 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 ||||| || ||||| ||| || || ||||||||||| ||| ||| ||||| | Sbjct 745820 TTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTC---ACTGGGTTCAACTTCCAAA 745764 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||| ||||| ||||| || || || || | ||||| Sbjct 745763 GTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 745723 Score = 143 bits (158), Expect = 6e-29 Identities = 164/219 (75%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | |||||| || || ||||| || || |||||||| || ||||| || Sbjct 745026 TCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACC 744967 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | ||| ||||| || || || | ||||| || ||||||||||| ||||| || Sbjct 744966 ATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTT 744907 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGT 195101 ||||| || || |||||| || ||||||||||| ||| ||| |||||||| || Sbjct 744906 ATCTTGGATCTTGGCCTTGACATTATCAATGGTGTC---ACTGGGTTCAACTTCAAGTGT 744850 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || ||||||||||| || || | ||||| Sbjct 744849 AATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 140 bits (154), Expect = 7e-28 Identities = 163/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | |||||| || || || ||||| || |||||||| || ||||| || Sbjct 744570 TCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACC 744511 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | ||| ||||| || || || || || ||||||||||| ||||| || ||||| Sbjct 744510 ATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTT 744451 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGT 195101 |||||||||||| ||||| || || ||||| || ||| ||| ||||| || || Sbjct 744450 ATCTTGAATTTTTGCTTTGACATTATCTATGGTATC---ACTGGGTTCAACTTCGAGTGT 744394 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || ||||| ||||| || || | |||||| Sbjct 744393 GATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | |||||| || || || ||||| || |||||||| || ||||| || Sbjct 745254 TCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACC 745195 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | |||||| || || || || | ||||| || || ||||||||||||||||| Sbjct 745194 ATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTT 745135 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 || || |||||| ||| || || || || ||||| ||| ||||| || |||| Sbjct 745134 ATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAAT 745075 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| |||||||| ||||| || || | ||||| Sbjct 745074 AGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | |||||| || || || ||||| || |||||||| || ||||| || Sbjct 745482 TCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACC 745423 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | |||||| || || || || || ||||| || || ||||||||||||||||| Sbjct 745422 ATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTT 745363 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 || || |||||| ||| || || || || ||||| ||| ||||| || |||| Sbjct 745362 ATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAAT 745303 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| ||||| || || | ||||| Sbjct 745302 AGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 134 bits (148), Expect = 3e-26 Identities = 162/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | ||||| || || || ||||| || |||||||| ||| ||||| || Sbjct 743886 TCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCC 743827 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || | ||| || || || || || | |||||||| ||||||||||| ||||| || Sbjct 743826 ATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTT 743767 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGT 195101 ||||| || || |||||| || ||||| ||||| ||| || ||||| || || Sbjct 743766 ATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTC---ACTGGGCTCAACTTCCAGTGT 743710 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || ||||| ||||| ||||||||||| | |||||| Sbjct 743709 TATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 116 bits (128), Expect = 8e-21 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || ||||| || |||||||| || || ||||| |||||||| |||||| Sbjct 743645 TGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCTTCCAGCTGC 743586 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || | || ||||| || || || || || |||||||||||||| || Sbjct 743585 TTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGAATCTTG 743526 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114 | || || |||||||||| || ||| ||||| || | ||| | ||||| || Sbjct 743525 TTTTTCACATTCTCAATGGAATC---ACTCGGCTCCACCTCTAAGGTGATAGTCTTGCCG 743469 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || |||||||| | |||||| Sbjct 743468 GTAAGCGTCTTTACGAAAATTTGCAT 743443 >seq1795 Length=846455 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || ||||||||||| |||||||| || | ||||| |||||||| Sbjct 394855 AACAAGATGGAGGGTTGACTCTTTTTGTATATTGTAGTCACTCAATGTTCTACCATCTTC 394796 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||| || || || ||||| |||| |||||| || |||||||| ||| Sbjct 394795 CAACTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCAGGAGGAATACCT 394747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109453297471097