Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1769 84.2 1e-11 >seq1769 Length=991018 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||| || | ||||||||||| || ||||||||| ||||| || || Sbjct 745037 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTG 744978 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| |||| || | |||||| || ||||| || | |||||||| ||| | || Sbjct 744977 AGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGA 744918 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || ||||| || ||||| ||||| || |||| || |||| || || Sbjct 744917 ATACCTTCCTTATCTTGGATCTTGGCCTTGAC--AT--TATCAATGGTGTCACTGGGTTC 744862 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| || | || || ||||| || || | ||| || ||||| ||||||||| Sbjct 744861 AACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCATA 744810 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||| || | ||||||||||| || ||| || || ||||| || || Sbjct 744581 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 744522 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| ||| |||| || | |||||| || ||||| || || || || |||||| | || Sbjct 744521 AGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGA 744462 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| || || ||| || |||||| |||| | |||| || ||||| Sbjct 744461 ATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACT 744402 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || || ||||| || || | || || ||||| || |||||| Sbjct 744401 TCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCATA 744354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625722664248