Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20]
1,991 sequences; 235,376,169 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1829 109 6e-19
>seq1829
Length=5883334
Score = 109 bits (120), Expect = 6e-19
Identities = 81/95 (85%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716
||| ||||||||||| || || || |||||||||||||||| ||||||||||| || ||
Sbjct 4211133 CATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTC 4211192
Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTT 18751
||| |||||| ||||| ||||||||||||||||
Sbjct 4211193 TAAAGATATATGATCCATGAAATCAAATGGATTTT 4211227
Score = 105 bits (116), Expect = 8e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404
|||| ||||||||| || || ||||||||||| ||||| || || || |||||||| | |
Sbjct 4220055 ACCAGATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAAACATGTTTTACA 4220114
Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACT 19464
||||| || ||||| | || | |||||||| || || ||||| | ||| |||
Sbjct 4220115 AAATGCTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTAGACATATCAACT 4220174
Query 19465 TCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATAT 19524
||||| ||||| || || || || || | || || | |||| || || | | |
Sbjct 4220175 TCTTCCGTCGTCCAGAAGGACGCTTCGGCCATCTTGTAAAACCTCCAGATGTCCTGGTGT 4220234
Query 19525 TGTATAGGAAATATAACAAATCT 19547
| ||| ||||| |||||||| ||
Sbjct 4220235 TTTATCGGAAAAATAACAAACCT 4220257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562094810517240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |