Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1829 105 8e-18 >seq1829 Length=5883334 Score = 105 bits (116), Expect = 8e-18 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||||||||||||||| || || |||||||||| | |||| |||||||| || || ||||| Sbjct 4211133 CATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTC 4211192 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 || ||||||| ||||| |||||||||||||| Sbjct 4211193 TAAAGATATATGATCCATGAAATCAAATGGATT 4211225 Score = 104 bits (114), Expect = 3e-17 Identities = 123/163 (75%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAAT-GTAAACCTTCATCTCTACTTATCAATT 37218 ||||||||| | |||||| ||| || ||| | | |||| |||||||||| |||| | Sbjct 4218208 ATATTTAAATATTAAACA-GCAGCATATCAAGCGCATACCT-CATCTCTACTGATCAGCT 4218265 Query 37219 CATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAA 37278 |||| || |||| || ||||| | || | ||| || | ||||||||| | ||||| Sbjct 4218266 CATTGCTGAACGTTAGACCGGGCATCACTCCACGTTTCTTCAACCAAAATATAGATGCAA 4218325 Query 37279 AAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321 ||||||| ||||| || || ||||| || ||||||||||| || Sbjct 4218326 AAGATCCTGAAAAAAAGATTCCTTCGACAGCTGCAAATGCCAC 4218368 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 37566 ttttCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625 |||||||| || |||||||||||||| |||||||| || | ||||| ||||| |||||| Sbjct 4220061 TTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAAACATGTTTTACAAAATGC 4220120 Query 37626 CTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 37685 | |||||||| || || |||||||| || || || || | ||||||||| || Sbjct 4220121 TTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTAGACATATCAACTTCTTCC 4220180 Query 37686 ACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATT 37745 ||||| || || || || || | | |||| || || | |||| ||| Sbjct 4220181 GTCGTCCAGAAGGACGCTTCGGCCATCTTGTAAAACCTCCAGATGTCCTGGTGTTTTATC 4220240 Query 37746 GGAAATATTACAAATCT 37762 ||||| || ||||| || Sbjct 4220241 GGAAAAATAACAAACCT 4220257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592302058715640