Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1753 84.2 2e-11 >seq1753 Length=1027297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 ||| |||||||| || ||||| ||||| |||| ||||| || ||||| | || || || Sbjct 984240 ATGTCTCCACTGAAAGCCGTAAACCGGCCCCAAATCTCCTTCCTCCCTATCTTCAAACCC 984299 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 ||||||||||| ||| || ||||| |||||||| | || || || || | Sbjct 984300 TAATTTGTCCAAAAAAGTTCTACTGCCATTGGCATCCCAGATGTGGACTCCTTTGTCAGC 984359 Query 30294 GAGCTCTTTGGAG--TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30351 || ||| ||| || || || || | ||||| || || || || || || || Sbjct 984360 CAG--CTTGAGAGCATTAGTTGAACCAGCAATAAACCAAAGAAGTTCTTCGACTACACCC 984417 Query 30352 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385 ||||| || || | ||||| || |||||||||| Sbjct 984418 TTCCAGAAAACTCGTTTGGTGGTTAGGAGGGGAA 984451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408607684766243