Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1769 163 2e-35 >seq1769 Length=991018 Score = 163 bits (180), Expect = 2e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || |||||||| ||||| ||||| || |||||||| || ||||| |||| || Sbjct 744564 AACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTC 744505 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || || ||||| ||||| |||| ||||||||| || || ||||| || ||||||||||| Sbjct 744504 TAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCTTG 744445 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||||| ||| ||| | |||| || ||| | ||| ||||| || |||| ||||| Sbjct 744444 AATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTTTT 744385 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || || ||||| ||||| || ||||| Sbjct 744384 GCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || |||||||| ||||| ||||| || |||||||| || ||||| |||| || Sbjct 745248 AACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTC 745189 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||| ||||| || ||||| |||||||| || ||||| || ||||||||||||||||| || Sbjct 745188 CAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTG 745129 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || ||| | || | |||||| | ||| ||||| || || | || || Sbjct 745128 GATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTT 745069 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| ||||| |||||||| Sbjct 745068 CCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 150 bits (166), Expect = 1e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| |||||||| || |||||||| || || |||||||| || ||||| |||| || Sbjct 744792 AACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCATCTTC 744733 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || ||||| || ||||| |||| |||||||||||| || ||||||||||||||||| || Sbjct 744732 TAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCCTG 744673 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || ||| | || | ||||| | ||| ||||| || || | || || Sbjct 744672 GATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTT 744613 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || ||||| ||||| ||||||||| Sbjct 744612 CCCTGTCAAGGTTTTGACAAAAATCTGCATG 744582 Score = 150 bits (166), Expect = 1e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || |||||||| ||||||||||| || |||||||| || ||||| |||| || Sbjct 745704 AACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTC 745645 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || || ||||| ||||| |||||||| || ||||| || ||||||||||||||||| || Sbjct 745644 TAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTG 745585 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || ||| | || | ||||| | ||| ||||| || || | || || Sbjct 745584 GATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTT 745525 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || ||||| ||||| ||||||||| Sbjct 745524 CCCAGTCAAGGTTTTGACAAAAATCTGCATG 745494 Score = 145 bits (160), Expect = 6e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| |||||||| || || || || || ||||||||||| | ||||| |||| || Sbjct 744108 AACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCATCCTC 744049 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||| ||||| || ||||| |||| | || ||||| || ||||| |||||||||||||| Sbjct 744048 CAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATCTTG 743989 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||||||| ||| ||| | || | || ||| | ||| ||||| ||||| | ||||| Sbjct 743988 AATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTTTT 743929 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| || || ||||| ||||| || ||||| Sbjct 743928 GCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 145 bits (160), Expect = 6e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || |||||||| ||||| ||||| || |||||||| || ||||| |||| || Sbjct 745476 AACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTC 745417 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || ||||| || ||||| |||| ||| || ||||| || ||||||||||||||||| || Sbjct 745416 TAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTG 745357 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| || ||| | || | |||||| | ||| ||||| || || | || || Sbjct 745356 GATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTT 745297 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| ||||| |||||||| Sbjct 745296 CCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 145 bits (160), Expect = 6e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || ||||| || || || |||||||| || |||||| |||| ||||| ||| Sbjct 745925 TGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGC 745866 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| |||||||||||| || ||||| |||||||| || || ||||| Sbjct 745865 TTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTC 745806 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | ||| ||||| | ||||| |||||| || || Sbjct 745805 GCCTTCACATTGTCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTC 745746 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 745745 AAGGTCTTGACAAAAATCTGCAT 745723 Score = 138 bits (152), Expect = 9e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| ||||||||||| || |||||||| || || |||||| |||| ||| Sbjct 743651 ACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCTTCC 743592 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || |||||||||||||| || || || || ||||| |||||| Sbjct 743591 AGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGA 743532 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || | ||| ||| | || | | ||| || ||||| || | |||| || ||| Sbjct 743531 ATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTCTTG 743472 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || ||||| || || ||||| Sbjct 743471 CCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396268784180787