Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1769 127 4e-24 seq1795 84.2 4e-11 >seq1769 Length=991018 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | || || || |||| ||| | ||| | ||| || |||||| || || Sbjct 744128 ATGCCACCACGCAGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCA 744069 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || |||||| ||| || || || || || |||||||| | ||| || ||||| || Sbjct 744068 CTCAATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGT 744009 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| ||||| | ||| | ||| ||| ||||| | ||| Sbjct 744008 GGAATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCA 743949 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || ||||| || || | ||||| ||||| |||||||| Sbjct 743948 ACTTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| ||||| || |||| ||| | ||| | ||||| || || || || Sbjct 744812 ATACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCA 744753 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | |||||| ||| ||||| || || || |||||||| | | ||||||||||||| Sbjct 744752 CTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGA 744693 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||| || ||||| | || | ||| ||| || ||| | ||| Sbjct 744692 GGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCA 744633 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || ||||| || ||||| | ||||| ||||| || ||||| Sbjct 744632 ACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 116 bits (128), Expect = 7e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| || | ||||| || |||| ||| | ||||| ||||| ||||| Sbjct 743679 AATTTGCATACCCCCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATT 743620 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| | ||||| ||| || | || || || ||||||||||| | |||||| Sbjct 743619 GTAGTCACTGAGGGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTG 743560 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || || ||||| ||||| || ||| |||| | ||| ||| | ||| Sbjct 743559 ATCCGGGGGGATACCCTCTTTGTCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACT 743500 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || |||| || ||||| || || || ||||| ||||| || |||||||| Sbjct 743499 CGGCTCCACCTCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | ||||| || |||| || | || | ||||| || || || || Sbjct 745724 ATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCA 745665 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | |||||| ||| ||||| ||||| || |||||||| || | || ||||||||| Sbjct 745664 CTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGA 745605 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||| || ||||| | || | ||| ||| || ||| | ||| Sbjct 745604 GGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCA 745545 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || ||||| || || || | ||||| ||||| || ||||| Sbjct 745544 ACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 104 bits (114), Expect = 4e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | ||| | || |||| || | ||| | || || || || Sbjct 744363 AATTTGCATACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTT 744304 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| | ||||| ||| || |||||||| || ||||||||||| | ||||| Sbjct 744303 GTAGTCACTGAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTG 744244 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || ||||| |||||||| ||||||| ||| | ||| ||||| || Sbjct 744243 ATCTGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACT 744184 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| | || || || || || || || ||||| || || || ||||| Sbjct 744183 TGGCTCTACTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 102 bits (112), Expect = 1e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 |||||| ||| ||||| ||||| || |||||||| | | |||||| || || || || Sbjct 744518 GTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATA 744459 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 || ||||||||||| ||||| | ||| | ||| || ||||| | |||||||| Sbjct 744458 CCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCG 744399 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| || || | ||||| ||||| |||||||| Sbjct 744398 AGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 102 bits (112), Expect = 1e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 |||||| ||| || || || || || |||||||| || | || ||||||||||| || Sbjct 745202 GTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATG 745143 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 ||||||||||| || ||||| | || | ||| ||||| ||| | |||||||| Sbjct 745142 CCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCG 745083 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || ||||| | ||||| ||||| || ||||| Sbjct 745082 AGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 102 bits (112), Expect = 1e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 |||||| ||| ||||| || || || |||||||| | | || ||||||||||| || Sbjct 745430 GTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATG 745371 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 ||||||||||| || ||||| | || | ||| ||||| ||| | ||||||||| Sbjct 745370 CCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCT 745311 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || | ||||| ||||| || ||||| Sbjct 745310 AGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 >seq1795 Length=846455 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || |||||||| | || || ||||| | || | |||||| ||||| ||||| Sbjct 394872 CCGCCTCTCAACCTTAGAACAAGATGGAGGGTTGACTCTTTTTGTATATTGTAGTCACTC 394813 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || |||||| ||| || || |||||||||||||| || | ||| |||||||||||||| Sbjct 394812 AATGTTCTACCATCTTCCAACTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCAGGAGGA 394753 Query 193254 ATTCCT 193259 || ||| Sbjct 394752 ATACCT 394747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899632009851120