Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20]
1,991 sequences; 235,376,169 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1769 127 4e-24
seq1795 84.2 4e-11
>seq1769
Length=991018
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||| | || || || |||| ||| | ||| | ||| || |||||| || ||
Sbjct 744128 ATGCCACCACGCAGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCA 744069
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| |||||| ||| || || || || || |||||||| | ||| || ||||| ||
Sbjct 744068 CTCAATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGT 744009
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||||||||| ||||| | ||| | ||| ||| ||||| | |||
Sbjct 744008 GGAATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCA 743949
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || ||||| || || | ||||| ||||| ||||||||
Sbjct 743948 ACTTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||| ||||| || |||| ||| | ||| | ||||| || || || ||
Sbjct 744812 ATACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCA 744753
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| |||||| ||| ||||| || || || |||||||| | | |||||||||||||
Sbjct 744752 CTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGA 744693
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||||||||| || ||||| | || | ||| ||| || ||| | |||
Sbjct 744692 GGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCA 744633
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || ||||| || ||||| | ||||| ||||| || |||||
Sbjct 744632 ACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583
Score = 116 bits (128), Expect = 7e-21
Identities = 168/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||| || | ||||| || |||| ||| | ||||| ||||| |||||
Sbjct 743679 AATTTGCATACCCCCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATT 743620
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| | ||||| ||| || | || || || ||||||||||| | ||||||
Sbjct 743619 GTAGTCACTGAGGGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTG 743560
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || || ||||| ||||| || ||| |||| | ||| ||| | |||
Sbjct 743559 ATCCGGGGGGATACCCTCTTTGTCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACT 743500
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| || |||| || ||||| || || || ||||| ||||| || ||||||||
Sbjct 743499 CGGCTCCACCTCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | ||||| || |||| || | || | ||||| || || || ||
Sbjct 745724 ATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCA 745665
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| |||||| ||| ||||| ||||| || |||||||| || | || |||||||||
Sbjct 745664 CTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGA 745605
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||||||||| || ||||| | || | ||| ||| || ||| | |||
Sbjct 745604 GGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCA 745545
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || ||||| || || || | ||||| ||||| || |||||
Sbjct 745544 ACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495
Score = 104 bits (114), Expect = 4e-17
Identities = 165/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | ||| | || |||| || | ||| | || || || ||
Sbjct 744363 AATTTGCATACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTT 744304
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| | ||||| ||| || |||||||| || ||||||||||| | |||||
Sbjct 744303 GTAGTCACTGAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTG 744244
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || ||||| |||||||| ||||||| ||| | ||| ||||| ||
Sbjct 744243 ATCTGGTGGAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACT 744184
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| ||| ||||| | || || || || || || || ||||| || || || |||||
Sbjct 744183 TGGCTCTACTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127
Score = 102 bits (112), Expect = 1e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256
|||||| ||| ||||| ||||| || |||||||| | | |||||| || || || ||
Sbjct 744518 GTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATA 744459
Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316
|| ||||||||||| ||||| | ||| | ||| || ||||| | ||||||||
Sbjct 744458 CCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCG 744399
Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| || || | ||||| ||||| ||||||||
Sbjct 744398 AGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355
Score = 102 bits (112), Expect = 1e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256
|||||| ||| || || || || || |||||||| || | || ||||||||||| ||
Sbjct 745202 GTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATG 745143
Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316
||||||||||| || ||||| | || | ||| ||||| ||| | ||||||||
Sbjct 745142 CCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCG 745083
Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || ||||| | ||||| ||||| || |||||
Sbjct 745082 AGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039
Score = 102 bits (112), Expect = 1e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256
|||||| ||| ||||| || || || |||||||| | | || ||||||||||| ||
Sbjct 745430 GTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATG 745371
Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316
||||||||||| || ||||| | || | ||| ||||| ||| | |||||||||
Sbjct 745370 CCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCT 745311
Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || | ||||| ||||| || |||||
Sbjct 745310 AGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267
>seq1795
Length=846455
Score = 84.2 bits (92), Expect = 4e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193
|| |||||||| | || || ||||| | || | |||||| ||||| |||||
Sbjct 394872 CCGCCTCTCAACCTTAGAACAAGATGGAGGGTTGACTCTTTTTGTATATTGTAGTCACTC 394813
Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253
|| |||||| ||| || || |||||||||||||| || | ||| ||||||||||||||
Sbjct 394812 AATGTTCTACCATCTTCCAACTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCAGGAGGA 394753
Query 193254 ATTCCT 193259
|| |||
Sbjct 394752 ATACCT 394747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899632009851120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |