Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1769 134 2e-26 seq1829 98.7 1e-15 >seq1769 Length=991018 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||||||||||||||| ||||| ||||| | ||||| ||| | Sbjct 743899 ATGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGT 743958 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || ||| ||||| |||||||||||||| || || ||||| || Sbjct 743959 GATACCATTGACAATGTCAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAG 744018 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||| |||||| ||| || |||||| | || ||| ||||| || ||||| ||| Sbjct 744019 CAAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTACAAT 744078 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || || ||| | || |||||||| || Sbjct 744079 ATTCAGAAGGAGTCAACACTTCATTTGGT 744107 Score = 109 bits (120), Expect = 8e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| |||||||| || ||||||||| ||||||| ||| Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||||| || |||||||||||||| ||||| || || Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| ||| ||||| ||| | |||||| ||||| | ||||| || Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040 || ||||| | || ||||| || || | ||||| Sbjct 745675 ATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAGATT 745712 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| ||||| || || ||||||||| | ||||| ||| Sbjct 744583 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 744642 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||||| || |||||||||||||| ||||| || ||| Sbjct 744643 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAA 744702 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||||| ||| || |||||| | |||||| ||||| | ||||| || Sbjct 744703 CAGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744762 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || |||||||| || | ||||| |||| ||| Sbjct 744763 ATCCAGAAAGAATCAACACTTCATTTGGTTCTCAGATTGCGAGGTGGT 744810 Score = 104 bits (114), Expect = 3e-17 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| |||||||| || ||||||||| ||||||| ||| Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||||| || |||||||||||||| ||||| || || Sbjct 745327 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745386 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | |||||| ||| || |||||| | |||||| ||||| | ||||| | Sbjct 745387 CAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACA-- 745444 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATT 156040 | ||||||| || | || ||||| || || | ||||| Sbjct 745445 ACATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATT 745484 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| |||||||| ||||| || ||| | ||||| ||| | Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| ||||| ||||||||||| || || || ||||| ||| Sbjct 744415 GATACCATAGATAATGTCAAAGCAAAAATTCAAGATAAAGAGGGTATTCCACCAGACCAA 744474 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | |||||| ||| ||||| ||| | |||||| ||||| | ||||| | Sbjct 744475 CAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTACA-- 744532 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATT 156040 | ||||||| || | || ||||| || || | ||||| Sbjct 744533 ACATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATT 744572 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| ||||| || || ||||||||| | ||||| ||| Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||||| || |||||||||||||| ||||| || || Sbjct 745099 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745158 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| ||| || |||||| | |||||| ||||| | ||||| | Sbjct 745159 CAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACA-- 745216 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATT 156040 | ||||||| || | || ||||| || || | ||||| Sbjct 745217 ACATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATT 745256 Score = 93.3 bits (102), Expect = 6e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||||||||| || || || ||||| ||| | Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||||| || || |||||||| || || ||||| ||| Sbjct 745783 GACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAA 745842 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAAC 155986 || | |||||| ||| || |||||| | |||||| |||||| Sbjct 745843 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAAC 745886 >seq1829 Length=5883334 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 18531 AAAATCTTTCTA-CCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAA 18589 ||||| || ||| ||| ||| ||||| || || || ||| || || || || |||||| Sbjct 4220043 AAAATGTTACTAACCAGATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAA 4220102 Query 18590 ACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTTTT 18649 |||| ||| | ||||| || |||| || || | |||||||| || | || || || Sbjct 4220103 ACATGTTTTACAAAATGCTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTA 4220162 Query 18650 GATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTTTATAA 18709 || | |||||||||||||| ||||| || || | ||||||| ||||| | | | Sbjct 4220163 GACATATCAACTTCTTCCGTCGTCCAGAAGGACGCTTCGGCCATCTTGTAAAACCTCCAG 4220222 Query 18710 ATATCTTCATGTTGTATAGGAAATAATA 18737 || || | |||| ||| ||||| |||| Sbjct 4220223 ATGTCCTGGTGTTTTATCGGAAA-AATA 4220249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731853785535600