Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20]
1,991 sequences; 235,376,169 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1769 134 3e-26
>seq1769
Length=991018
Score = 134 bits (148), Expect = 3e-26
Identities = 139/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
||||| |||||| ||||||| |||| ||||| || || |||||||| || | |||
Sbjct 744080 ATATTGTAATCACTCAATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTT 744021
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
|| ||||| ||||| || |||||||||||||| ||||| ||| ||||| || | |
Sbjct 744020 TGCTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTA 743961
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| | ||| ||||| |||||||| ||||| ||||| |||||||||| ||| || |||
Sbjct 743960 TCACTTGGTTCAACTTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGC 743901
Query 192535 AT 192536
||
Sbjct 743900 AT 743899
Score = 113 bits (124), Expect = 9e-20
Identities = 119/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| ||||||||||| |||||||| ||||| | |||||||| ||||| || ||||| |
Sbjct 744283 CATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCT 744224
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
||||||| ||||| ||| ||||| ||||| || | |||||||| | ||||
Sbjct 744223 TATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAA 744164
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || || ||||| | |||||| | || ||||||||
Sbjct 744163 TTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127
Score = 109 bits (120), Expect = 1e-18
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || |||||| | |||| |||| || || |||||||||||||| || | |
Sbjct 744537 GATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACG 744478
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|||||| || ||||| || || ||||||||||| ||||| ||| |||||| ||| |
Sbjct 744477 CTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGT 744418
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||| | ||| ||||| || || || ||||| ||||| || ||||| | ||| || ||
Sbjct 744417 ATCACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTG 744358
Query 192534 CAT 192536
|||
Sbjct 744357 CAT 744355
Score = 105 bits (116), Expect = 1e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405
||||| ||| || |||||| | ||||| |||| || || ||||||||||||||
Sbjct 745685 TCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAA 745626
Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465
|| || | || |||||||| || || ||||||||||| || ||||| || |||||
Sbjct 745625 ATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTG 745566
Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525
|| | || | ||| |||||||| ||||| || || ||||| || ||||| | |
Sbjct 745565 TCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACA 745506
Query 192526 AATATCTGCAT 192536
|| ||||||||
Sbjct 745505 AAAATCTGCAT 745495
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405
||||| ||| || |||||| | ||||| |||| || || ||||||||||||||
Sbjct 745001 TCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAA 744942
Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465
|| || | || ||||| || || || ||||| |||||||| || || || ||||||
Sbjct 744941 ATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTA 744882
Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525
|| | || | ||| ||||| || ||||| ||||| ||||| || ||||| | |
Sbjct 744881 TCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACA 744822
Query 192526 AATATCTGCAT 192536
|| ||||||||
Sbjct 744821 AAAATCTGCAT 744811
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| | | | || ||||| | || | ||||| ||| || ||||||
Sbjct 744812 ATACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCA 744753
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| |||| |||| || || || || |||||||| || | | ||||||||||||
Sbjct 744752 CTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGA 744693
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||||||||| || ||||| || ||||| || | || | |||
Sbjct 744692 GGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCA 744633
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || ||||| || || || || || ||||| | ||| ||||||||
Sbjct 744632 ACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || |||||| | |||| |||| ||||| || || |||||||| || || |
Sbjct 745221 GATGTTGTAATCACTGAGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACG 745162
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| |||||||| || || ||||||||||| || ||||| || ||||| ||||
Sbjct 745161 TTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGT 745102
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| | ||| ||||| || ||||| || || || || || ||||| | ||| |||||
Sbjct 745101 GTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTG 745042
Query 192534 CAT 192536
|||
Sbjct 745041 CAT 745039
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || |||||| | |||| |||| || || || || |||||||| || | |
Sbjct 745449 GATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACG 745390
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| |||||||| || || ||||||||||| || ||||| || ||||| ||||
Sbjct 745389 TTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGT 745330
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| | ||| |||||||| ||||| || || ||||| || ||||| | ||| |||||
Sbjct 745329 GTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTG 745270
Query 192534 CAT 192536
|||
Sbjct 745269 CAT 745267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984454886222850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |