Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1769 134 3e-26 >seq1769 Length=991018 Score = 134 bits (148), Expect = 3e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| |||||| ||||||| |||| ||||| || || |||||||| || | ||| Sbjct 744080 ATATTGTAATCACTCAATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTT 744021 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| ||||| || |||||||||||||| ||||| ||| ||||| || | | Sbjct 744020 TGCTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTA 743961 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || | ||| ||||| |||||||| ||||| ||||| |||||||||| ||| || ||| Sbjct 743960 TCACTTGGTTCAACTTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGC 743901 Query 192535 AT 192536 || Sbjct 743900 AT 743899 Score = 113 bits (124), Expect = 9e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| ||||||||||| |||||||| ||||| | |||||||| ||||| || ||||| | Sbjct 744283 CATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCT 744224 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 ||||||| ||||| ||| ||||| ||||| || | |||||||| | |||| Sbjct 744223 TATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAA 744164 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || || ||||| | |||||| | || |||||||| Sbjct 744163 TTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || |||||| | |||| |||| || || |||||||||||||| || | | Sbjct 744537 GATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACG 744478 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||| || ||||| || || ||||||||||| ||||| ||| |||||| ||| | Sbjct 744477 CTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGT 744418 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| | ||| ||||| || || || ||||| ||||| || ||||| | ||| || || Sbjct 744417 ATCACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTG 744358 Query 192534 CAT 192536 ||| Sbjct 744357 CAT 744355 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| || |||||| | ||||| |||| || || |||||||||||||| Sbjct 745685 TCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAA 745626 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || || | || |||||||| || || ||||||||||| || ||||| || ||||| Sbjct 745625 ATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTG 745566 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 || | || | ||| |||||||| ||||| || || ||||| || ||||| | | Sbjct 745565 TCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACA 745506 Query 192526 AATATCTGCAT 192536 || |||||||| Sbjct 745505 AAAATCTGCAT 745495 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| || |||||| | ||||| |||| || || |||||||||||||| Sbjct 745001 TCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAA 744942 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || || | || ||||| || || || ||||| |||||||| || || || |||||| Sbjct 744941 ATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTA 744882 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 || | || | ||| ||||| || ||||| ||||| ||||| || ||||| | | Sbjct 744881 TCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACA 744822 Query 192526 AATATCTGCAT 192536 || |||||||| Sbjct 744821 AAAATCTGCAT 744811 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| | | | || ||||| | || | ||||| ||| || |||||| Sbjct 744812 ATACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCA 744753 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | |||| |||| || || || || |||||||| || | | |||||||||||| Sbjct 744752 CTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGA 744693 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || ||||| || ||||| || | || | ||| Sbjct 744692 GGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCA 744633 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || ||||| || || || || || ||||| | ||| |||||||| Sbjct 744632 ACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || |||||| | |||| |||| ||||| || || |||||||| || || | Sbjct 745221 GATGTTGTAATCACTGAGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACG 745162 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || |||||||| || || ||||||||||| || ||||| || ||||| |||| Sbjct 745161 TTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGT 745102 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || | ||| ||||| || ||||| || || || || || ||||| | ||| ||||| Sbjct 745101 GTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTG 745042 Query 192534 CAT 192536 ||| Sbjct 745041 CAT 745039 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || |||||| | |||| |||| || || || || |||||||| || | | Sbjct 745449 GATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACG 745390 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || |||||||| || || ||||||||||| || ||||| || ||||| |||| Sbjct 745389 TTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGT 745330 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || | ||| |||||||| ||||| || || ||||| || ||||| | ||| ||||| Sbjct 745329 GTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTG 745270 Query 192534 CAT 192536 ||| Sbjct 745269 CAT 745267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984454886222850