Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1769 122 2e-22 seq780 89.7 9e-13 >seq1769 Length=991018 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| | || ||||| | || | ||| || |||||| ||||| Sbjct 744128 ATGCCACCACGCAGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCA 744069 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || | || ||||| || || ||||||||||| | ||| || || || ||| Sbjct 744068 CTCAATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGT 744009 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| ||||| ||| ||||| || ||||| | ||| Sbjct 744008 GGAATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCA 743949 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| ||||| ||||| |||||||||| || || ||||| Sbjct 743948 ACTTCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||||||||| |||||||||||||| | ||||| || ||||| || ||||| ||| Sbjct 744281 TCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 744222 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| ||| ||||| |||||| || | |||||||| | ||||| Sbjct 744221 TCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAATT 744162 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| | |||||| | ||| |||||||| Sbjct 744161 GTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 113 bits (124), Expect = 8e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || || ||||||||||||||||| | | ||||||||| ||||| || || |||||| Sbjct 744509 TCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTA 744450 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| ||| |||||| ||| ||||| | ||| ||||| || || || Sbjct 744449 TCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATT 744390 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || ||||| | || || ||||| Sbjct 744389 GTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || || ||||||||||||||||| || | || || ||||| || || ||||||||| Sbjct 745649 TCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTA 745590 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| || ||||| || || || | ||| |||||||| ||||| Sbjct 745589 TCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATA 745530 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || ||||| | || |||||||| Sbjct 745529 GTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || || ||||||||||||||||| || | || || || || || || ||||| ||| Sbjct 744965 TCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTA 744906 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || || |||||| || || || | ||| ||||| || ||||| Sbjct 744905 TCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATT 744846 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || ||||| | || |||||||| Sbjct 744845 GTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || || ||||||||||| || | || || ||||| || || ||||||||| Sbjct 745193 TCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTA 745134 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| || ||||| ||||| || | ||| ||||| || ||||| Sbjct 745133 TCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATA 745074 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || || ||||| | || |||||||| Sbjct 745073 GTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || || || || ||||||||||| | | || || ||||| || || ||||||||| Sbjct 745421 TCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTA 745362 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| || ||||| ||||| || | ||| |||||||| ||||| Sbjct 745361 TCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAATA 745302 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || ||||| | || |||||||| Sbjct 745301 GTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 >seq780 Length=2529187 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025 |||||||| ||||| |||||| || ||||| || ||||||||| |||||| || Sbjct 180138 CCTTCTTTGTCTTGAATTTTAGACTTGACATTTTCAATGCTATCTGACGGTTCTACCTCG 180079 Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||||||||||||| || || ||||| | ||| |||||||| Sbjct 180078 AGGGTAATGGTTTTACCCGTCAACGTTTTCACGAAGATCTGCAT 180035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905113473427800