Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1292 158 2e-32 seq692 158 2e-32 seq1327 145 1e-28 seq1023 145 1e-28 >seq1292 Length=7111 Score = 158 bits (174), Expect = 2e-32 Identities = 182/243 (75%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 2007 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 2066 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | | ||| ||| | ||||| |||| Sbjct 2067 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTAGTGATGGTGGATCTCTTGTTGTAGT 2126 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| | |||| || || | ||||||||||| || || || Sbjct 2127 GGGCG--AGGCGAGAAGCTTCGGCGGCGATTCGCTCAAAGATGTCGTTGACGAATGAATT 2184 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| |||||||| | |||| | ||||||| ||| ||||| |||||||| |||||||| Sbjct 2185 CATTATCGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTGAACCTGCTTCAGCACCTT 2244 Query 1485708 GTA 1485710 ||| Sbjct 2245 GTA 2247 >seq692 Length=2860329 Score = 158 bits (174), Expect = 2e-32 Identities = 182/243 (75%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 2672469 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 2672528 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | | ||| ||| | ||||| |||| Sbjct 2672529 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTAGTGATGGTGGATCTCTTGTTGTAGT 2672588 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| | |||| || || | ||||||||||| || || || Sbjct 2672589 GGGCG--AGGCGAGAAGCTTCGGCGGCGATTCGCTCAAAGATGTCGTTGACGAATGAATT 2672646 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| |||||||| | |||| | ||||||| ||| ||||| |||||||| |||||||| Sbjct 2672647 CATTATCGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTGAACCTGCTTCAGCACCTT 2672706 Query 1485708 GTA 1485710 ||| Sbjct 2672707 GTA 2672709 Score = 149 bits (164), Expect = 1e-29 Identities = 180/243 (74%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 2365082 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 2365141 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | || ||| ||| | ||||| |||| Sbjct 2365142 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTGGTGATTGTGGATCTCTTGTTGTAGT 2365201 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| |||| || || | ||||| ||||| ||||| || Sbjct 2365202 GGGCG--AGGCGAGAAGCTTCGGCTGCGATTCGTTCAAAGATGTCATTGACGAACGAATT 2365259 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| || ||||| | |||| | ||||||| ||| ||||| |||||||| ||||| || Sbjct 2365260 CATTATTGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTGAACCTGCTTCAGCACTTT 2365319 Query 1485708 GTA 1485710 ||| Sbjct 2365320 GTA 2365322 Score = 149 bits (164), Expect = 1e-29 Identities = 180/243 (74%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 2374968 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 2375027 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | || ||| ||| | ||||| |||| Sbjct 2375028 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTGGTGATTGTGGATCTCTTGTTGTAGT 2375087 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| |||| || || | ||||| ||||| ||||| || Sbjct 2375088 GGGCG--AGGCGAGAAGCTTCGGCTGCGATTCGTTCAAAGATGTCATTGACGAACGAATT 2375145 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| || ||||| | |||| | ||||||| ||| ||||| |||||||| ||||| || Sbjct 2375146 CATTATTGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTGAACCTGCTTCAGCACTTT 2375205 Query 1485708 GTA 1485710 ||| Sbjct 2375206 GTA 2375208 Score = 149 bits (164), Expect = 1e-29 Identities = 180/243 (74%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 2511761 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 2511820 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | || ||| ||| | ||||| |||| Sbjct 2511821 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTGGTGATTGTGGATCTCTTGTTGTAGT 2511880 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| |||| || || | ||||| ||||| ||||| || Sbjct 2511881 GGGCG--AGGCGAGAAGCTTCGGCTGCGATTCGTTCAAAGATGTCATTGACGAACGAATT 2511938 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| || ||||| | |||| | ||||||| ||| ||||| |||||||| ||||| || Sbjct 2511939 CATTATTGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTGAACCTGCTTCAGCACTTT 2511998 Query 1485708 GTA 1485710 ||| Sbjct 2511999 GTA 2512001 >seq1327 Length=8175 Score = 145 bits (160), Expect = 1e-28 Identities = 180/243 (74%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| ||| Sbjct 6920 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 6979 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | || ||| ||| | ||||| |||| Sbjct 6980 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTGGTGATTGTGGATCTCTTGTTGTAGT 7039 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| |||| || || | ||||| ||||| ||||| || Sbjct 7040 GGGCG--AGGCGAGAAGCTTCGGCTGCGATTCGTTCAAAGATGTCATTGACGAACGAATT 7097 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| || ||||| | |||| | ||||||| ||| ||||| |||||||| ||||| || Sbjct 7098 CATTATTGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTG-ACCTGCTTCAGCACTTT 7156 Query 1485708 GTA 1485710 ||| Sbjct 7157 GTA 7159 >seq1023 Length=8870 Score = 145 bits (160), Expect = 1e-28 Identities = 179/243 (74%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || |||||||||| |||||| |||||| | | Sbjct 4041 TGTACTTGGTGACGGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGTA 3982 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | || | ||||| |||||||| || | | || ||| ||| | ||||| |||| Sbjct 3981 ACAGAAGCCTGACGGCCGTCTGGATTTCTCTGCTGGTGATTGTGGATCTCTTGTTGTAGT 3922 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||||| || |||| |||| || || | ||||| ||||| ||||| || Sbjct 3921 GGGCG--AGGCGAGAAGCTTCGGCTGCGATTCGTTCAAAGATGTCATTGACGAACGAATT 3864 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 ||| || ||||| | |||| | ||||||| ||| ||||| |||||||| ||||| || Sbjct 3863 CATTATTGACATGGCTTTGCCGCTGATGCCCGTGTCCGGGTGAACCTGCTTCAGCACTTT 3804 Query 1485708 GTA 1485710 ||| Sbjct 3803 GTA 3801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916034608249049