Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1769 145 1e-29 seq1795 96.9 5e-15 >seq1769 Length=991018 Score = 145 bits (160), Expect = 1e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||||| || || |||||||||||| | || || |||| | | Sbjct 743900 TGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGTG 743959 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| ||||| ||| ||||||||| |||||||| ||||| | Sbjct 743960 ATACCATTGACAATGTCAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAGC 744019 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| || || || || || ||| |||||| || | ||||| |||| Sbjct 744020 AAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTACAATA 744079 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || || || || || | ||||| || Sbjct 744080 TTCAGAAGGAGTCAACACTTCATTTGGT 744107 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| || || ||||||||||| || | || || || | | | Sbjct 743672 TGCAAATTTTCGTAAAAACCTTGACCGGAAAAACAATAACACTGGAAGTTGAGCCCAGTG 743731 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || || || ||| ||| ||||| ||||| || ||||||| Sbjct 743732 ACACTATTGACAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAAC 743791 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || ||||| ||||| ||| ||||| | | ||||| || | Sbjct 743792 AACGCTTGATTTTTGCTGGCAAACAGTTAGAGGATGGCAGAACCCTTAGTGATTACAACA 743851 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| ||||| || | ||||| || | ||||| | || |||| Sbjct 743852 TCCAAAAGGAATCAACACTTCATTTGGTTCTCAGATTACGTGGTGGTA 743899 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || ||||| || || ||||| | || || |||| | || Sbjct 744584 TGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGCG 744643 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||||| || ||||||||||||||| || ||||||| Sbjct 744644 ACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAAC 744703 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| || || || ||||| ||| |||||| | | ||||| || | Sbjct 744704 AGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAACA 744763 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || | ||||| || | |||| |||| |||| Sbjct 744764 TCCAGAAAGAATCAACACTTCATTTGGTTCTCAGATTGCGAGGTGGTA 744811 Score = 114 bits (126), Expect = 2e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || || || || ||||| | || || |||| | || Sbjct 745496 TGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGCG 745555 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||||| || ||||||||||||||| || ||||| | Sbjct 745556 ACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAGC 745615 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| |||||||| ||||| ||| |||||| | | ||||| || | Sbjct 745616 AACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAACA 745675 Query 146212 TACAAAAAGAATCGAC 146227 | ||||||||||| || Sbjct 745676 TCCAAAAAGAATCAAC 745691 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || || ||||||||||| |||| || |||| | | Sbjct 744812 TGCAGATTTTTGTCAAAACTTTGACTGGGAAAACAATTACACTTGAAGTTGAACCCAGTG 744871 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || || || ||| ||| ||||| ||||| || ||||| | Sbjct 744872 ACACCATTGATAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAGC 744931 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| |||||||| ||||| ||| |||||| | | ||||| || | Sbjct 744932 AACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAACA 744991 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 744992 TCCAGAAAGAATCAAC 745007 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || || || || ||||| | || || |||| | || Sbjct 745268 TGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGCG 745327 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| || ||||| || ||||||||||||||| || ||||| | Sbjct 745328 ACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAGC 745387 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || || || ||||| ||| |||||| | | ||||| || | Sbjct 745388 AACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAACA 745447 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| ||||| || Sbjct 745448 TCCAAAAGGAATCAAC 745463 Score = 102 bits (112), Expect = 1e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || ||||| || || ||||| | || || |||| | || Sbjct 745040 TGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGCG 745099 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| || ||||| || ||||||||||||||| || ||||| | Sbjct 745100 ACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAGC 745159 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || || || || || ||| |||||| | | ||||| || | Sbjct 745160 AACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAACA 745219 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| ||||| || Sbjct 745220 TCCAAAAGGAATCAAC 745235 >seq1795 Length=846455 Score = 96.9 bits (106), Expect = 5e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| ||||| || ||||||||||||||||| ||||| || ||||| || || ||| ||| Sbjct 394747 AGGTATTCCTCCTGATCAACAAAGACTCATCTTTGCCGGAAAACAGTTGGAAGATGGTAG 394806 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| || | || || |||||||||||||| || || ||||| | || || | || || Sbjct 394807 AACATTGAGTGACTACAATATACAAAAAGAGTCAACCCTCCATCTTGTTCTAAGGTTGAG 394866 Query 146252 AGGAGG 146257 ||| || Sbjct 394867 AGGCGG 394872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786146834283720