Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1769 159 3e-34 >seq1769 Length=991018 Score = 159 bits (176), Expect = 3e-34 Identities = 167/214 (78%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGAATC 29633 || ||||||||||| || || || || ||||| || ||||| | ||||| | | | ||| Sbjct 744110 AGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTT-CTACCATC 744052 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | || ||||||||| | |||| |||||||||||| || |||||||| ||||| || Sbjct 744051 CTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATC 743992 Query 29694 TTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 ||| |||||||| ||||||| | || | || ||| |||| ||||| ||||| || | Sbjct 743991 TTG-AATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTG 743933 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||||| || ||||||||||| || ||||| Sbjct 743932 TTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 143 bits (158), Expect = 2e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || ||||| ||||| ||||| ||||| | ||| | | ||| Sbjct 744566 AGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCT 744507 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||||| |||||| | |||| | || || || || |||||||||||||| ||| Sbjct 744506 TCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCT 744447 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||||| ||||||| | |||| || ||| |||| ||||| || || || || Sbjct 744446 TG-AATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGT 744388 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||| |||||||| ||||| || ||||| Sbjct 744387 TTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||||||||| || ||||| ||||| ||||| ||||| || ||| | ||| Sbjct 743882 AGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCCATCC 743823 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||||||||| | ||||| | ||| ||||| || |||||||| || || ||| Sbjct 743822 TCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTATCT 743763 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || |||||| | || | ||||||| | || ||||| || ||||| ||| Sbjct 743762 TGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATTGTT 743703 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| || || || ||||| Sbjct 743702 TTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || ||||||||||| ||||| ||||| | || | | ||| Sbjct 745706 AGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCT 745647 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||||| |||||| | ||||| | ||||||||| || ||||| || ||||| || Sbjct 745646 TCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCC 745587 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | |||| || ||| | || | ||||| |||| ||||| || || ||||| Sbjct 745586 TGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTC 745527 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| |||||||| ||||| |||||||| Sbjct 745526 TTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || ||||| ||||| ||||| || || | ||| | ||| Sbjct 744338 AGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCATCT 744279 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||||||||||||| | || || | ||| ||||| || |||||||| || || ||| Sbjct 744278 TCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 744219 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | ||| ||| ||| | |||| ||||||| | |||||||| | || || || Sbjct 744218 TGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAATTGTC 744159 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| | ||||| || || |||||||| Sbjct 744158 TTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||||||||| || |||||||| || ||||| ||||| | ||| | | ||| Sbjct 744794 AGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCATCT 744735 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | || ||||||||| | |||| | || ||||| || ||||| || ||||| || Sbjct 744734 TCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCC 744675 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | |||| || ||| | || | ||||| |||| ||||| || || ||||| Sbjct 744674 TGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTC 744615 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| ||||| |||||||| Sbjct 744614 TTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||||||||| || |||||||| || || || || || | ||| | ||| Sbjct 743654 AGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCT 743595 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || || || ||||||||| | || || | || |||||||| || ||||||||||||||| Sbjct 743594 TCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCT 743535 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || | ||| ||| | || | | ||| | || || || | || ||||| Sbjct 743534 TGAATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTC 743475 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | || || || || || ||||| Sbjct 743474 TTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385209852535731