Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1769 179 7e-40 seq1795 96.9 7e-15 >seq1769 Length=991018 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| | ||||| ||||| || || ||||||||||| || || |||||| Sbjct 745039 TACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCAC 744980 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||||||| ||||||| ||||| |||||||| || | | ||| |||||||||| Sbjct 744979 TGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAG 744920 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| ||||| || || ||||| ||||| || ||| | ||||| | Sbjct 744919 GAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAA 744860 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || || || || ||||| || || ||||| |||||||| Sbjct 744859 CTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 176 bits (194), Expect = 9e-39 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || || || || || || ||||| ||||| |||||| | ||||||| || Sbjct 744110 AGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCATCC 744051 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | || || |||||||| || |||||||| |||||||| || || ||||| |||||| Sbjct 744050 TCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATCT 743991 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 ||||| |||||||| ||||| ||||| |||||| | ||||| ||||||| ||| || || Sbjct 743990 TGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTT 743931 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| ||||| || || ||||| || ||||| Sbjct 743930 TTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| ||| | ||||| || || || || ||||||||||| || || |||||| Sbjct 744811 TACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCAC 744752 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || ||||||| ||||||| || || |||||||| || || | |||||||| |||| Sbjct 744751 TGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAG 744692 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||| || || ||||| || ||||| ||||| || || | ||||| | Sbjct 744691 GAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAA 744632 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || ||||| |||||||| || || ||||| |||||||| Sbjct 744631 CTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| | ||||| ||||| || || ||||| || || || || || ||| Sbjct 744355 TACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCAC 744296 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || |||| || ||||| | |||||| |||||||| |||| | |||||||||||| | Sbjct 744295 TGAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTG 744236 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| || || ||||| ||||| || || || ||| | || |||| Sbjct 744235 GAATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTA 744176 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || ||||| || || | || || || || |||||||| Sbjct 744175 CTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| ||||| || || ||||| || || || || |||||| || ||||||| ||| Sbjct 744566 AGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCT 744507 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 |||| ||||| |||||||| || || | ||||| ||||| || || || || |||||| Sbjct 744506 TCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCT 744447 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 ||||| |||||||| ||||| || || |||||| | ||||| ||||| | || || || Sbjct 744446 TGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTT 744387 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| ||||| || || ||||| || ||||| Sbjct 744386 TTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| || || || || ||||| || || || || |||||| || |||| || || Sbjct 743882 AGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCCATCC 743823 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 |||| ||||| |||||||| || | | ||||||||||||||| || |||||||||||| Sbjct 743822 TCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTATCT 743763 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| || || ||||| ||||| || ||| | || || ||||||| ||||| || Sbjct 743762 TGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATTGTT 743703 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| || ||||| || || ||||| Sbjct 743702 TTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| ||||| ||||| ||||| || || |||||| || |||| || ||||| | || Sbjct 745926 GTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTG 745867 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || |||||||| || || | ||||||||||| || || ||||| || || || || || Sbjct 745866 CTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTT 745807 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| ||||| || ||| | ||||| ||||||||||| ||||| || || || Sbjct 745806 CGCCTTCACATTGTCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGT 745747 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| ||||| |||||||| Sbjct 745746 CAAGGTCTTGACAAAAATCTGCAT 745723 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| | || || || || || |||||||||||||| ||||| || ||| Sbjct 743671 TACCCCCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCAC 743612 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || |||| || ||||| || || || |||||||| |||| | |||||||| || | Sbjct 743611 TGAGGGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGG 743552 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || ||||||||||| ||| ||||| ||||| | |||| | || || | Sbjct 743551 GGATACCCTCTTTGTCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCA 743492 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || || |||||||| || | ||||||||| || || ||||| Sbjct 743491 CCTCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 >seq1795 Length=846455 Score = 96.9 bits (106), Expect = 7e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||||||| | ||||| | || || || || ||||| |||||||| || ||| Sbjct 394872 CCGCCTCTCAACCTTAGAACAAGATGGAGGGTTGACTCTTTTTGTATATTGTAGTCACTC 394813 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | ||||||| ||||| | |||||||| |||||||| |||||||||||||| ||||| Sbjct 394812 AATGTTCTACCATCTTCCAACTGTTTTCCGGCAAAGATGAGTCTTTGTTGATCAGGAGGA 394753 Query 82704 ATTCCT 82709 || ||| Sbjct 394752 ATACCT 394747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981802153894949