Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq1748 100 4e-16 seq1526 98.7 1e-15 seq1054 98.7 1e-15 seq1020 98.7 1e-15 seq933 98.7 1e-15 >seq1748 Length=1038726 Score = 100 bits (110), Expect = 4e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| | Sbjct 62920 TAGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 62979 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 62980 TTCCCCGACGGGGAG 62994 Score = 100 bits (110), Expect = 4e-16 Identities = 68/75 (91%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 62921 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 62980 Query 11787 TCCCCGACGAGGAGG 11801 ||||||||| ||||| Sbjct 62981 TCCCCGACGGGGAGG 62995 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 62994 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 62935 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 62934 TACTAACGAGGA 62923 >seq1526 Length=1503564 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 13106 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 13047 Query 11787 TCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 13046 TCCCCGACGGGGAG 13033 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 13104 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 13045 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 13044 CCCGACGGGGAG 13033 Score = 96.9 bits (106), Expect = 5e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||| Sbjct 13031 AACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 13090 Query 139411 TATACTAACGAGGATTTTGGT 139431 |||||||||||||| || ||| Sbjct 13091 TATACTAACGAGGACTTCGGT 13111 >seq1054 Length=2124587 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 832368 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 832427 Query 11787 TCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 832428 TCCCCGACGGGGAG 832441 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 832370 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 832429 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 832430 CCCGACGGGGAG 832441 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 832441 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 832382 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 832381 TACTAACGAGGACTT 832367 >seq1020 Length=2255758 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 1623729 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 1623670 Query 11787 TCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 1623669 TCCCCGACGGGGAG 1623656 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1623727 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1623668 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1623667 CCCGACGGGGAG 1623656 Score = 93.3 bits (102), Expect = 6e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||| Sbjct 1623655 ACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 1623714 Query 139412 ATACTAACGAGGATTT 139427 ||||||||||||| || Sbjct 1623715 ATACTAACGAGGACTT 1623730 >seq933 Length=2349635 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 183681 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 183622 Query 11787 TCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 183621 TCCCCGACGGGGAG 183608 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 183679 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 183620 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 183619 CCCGACGGGGAG 183608 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 186447 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 186388 Query 11787 TCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 186387 TCCCCGACGGGGAG 186374 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 186445 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 186386 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 186385 CCCGACGGGGAG 186374 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/74 (91%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| ||| Sbjct 359763 GTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 359704 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 359703 CCCCGACGGGGAGG 359690 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 359762 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 359703 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 359702 CCCGACGGGGAG 359691 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 184308 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 184249 Query 11787 TCCCCGACGAGGAGG 11801 | ||||||| ||||| Sbjct 184248 TTCCCGACGGGGAGG 184234 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 184306 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTT 184247 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 184246 CCCGACGGGGAG 184235 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 183608 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 183667 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 183668 TACTAACGAGGACTT 183682 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 186374 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 186433 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 186434 TACTAACGAGGACTT 186448 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||| ||| |||| |||| ||||| | ||||||||||||||| || Sbjct 187611 AGTCCTCGTTAGTATAGTAGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTAAAT 187670 Query 11787 TCCCCGACGAGGAG-GGAGGTT 11807 ||||||||| |||| |||||| Sbjct 187671 TCCCCGACGGGGAGACGAGGTT 187692 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||| || ||||| |||| ||||| | ||||||||||||||| |||| Sbjct 187613 TCCTCGTTAGTATAGTAGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTAAATTC 187672 Query 8718 CCCGACGAGGAGCAGAGG 8735 ||||||| |||| |||| Sbjct 187673 CCCGACGGGGAGACGAGG 187690 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 359691 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 359750 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 359751 TACTAACGAGGA 359762 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||| | | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 184235 CTCCCCGTCGGGAAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 184294 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 184295 TACTAACGAGGACTT 184309 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | ||||||||||||||| | |||| |||||||| | || |||| Sbjct 187684 CTCCCCGTCGGGGAATTTAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACTACTA 187625 Query 139413 TACTAACGAGGATTT 139427 |||||||||||| || Sbjct 187624 TACTAACGAGGACTT 187610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652828552325040