Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1769 93.3 4e-14 >seq1769 Length=991018 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || || |||||||| |||||||| || | | || || || ||| Sbjct 743648 AAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCTTCCAGC 743589 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| | ||||| || || || ||||| || || ||||| ||| Sbjct 743588 TGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGAATC 743529 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || | || | | ||||| | || | |||||||| || | ||||| || |||||| Sbjct 743528 TTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTCTTGCCG 743469 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||||||||| ||||| Sbjct 743468 GTAAGCGTCTTTACGAAAATTTGCAT 743443 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513 ||||| | || || |||||||| || |||||||| | | || || | || || | Sbjct 744788 AAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCA-TCTTCTAA 744730 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| || ||||| || || ||||| |||||||| || || ||| Sbjct 744729 CTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCCTGGAT 744670 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| |||||| | || || || |||| || | || || || Sbjct 744669 TTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCC 744610 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||||| || |||||||||||| Sbjct 744609 TGTCAAGGTTTTGACAAAAATCTGCATG 744582 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| | ||| ||||| || |||| | || || || || ||||| || |||||||| Sbjct 743825 TCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTA 743766 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | |||| ||||| ||||||| || || | || | Sbjct 743765 TCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATT 743706 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||||||| |||||||||||||| ||||| Sbjct 743705 GTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513 || || | ||| || |||||||| || |||||||| | | || || | || || | Sbjct 745016 AAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCA-TCTTCTAA 744958 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || |||| | || ||||| || ||||| || |||||||| || ||| Sbjct 744957 CTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGAT 744898 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | |||| ||||| |||| || || || | || | ||||| || Sbjct 744897 CTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCC 744838 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| |||||| || ||||||||||| Sbjct 744837 AGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGC-CCATCGTGGACGAGTCCTCGAG 133513 ||||| | || ||||| ||||| ||||||||||| | | || | || | ||||| | Sbjct 744104 AAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCA-TCCTCCAA 744046 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| || | ||||| || || || || ||||| || || ||| Sbjct 744045 CTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATC-TTGAA 743987 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||||| |||| | |||| || || | || || || || | || | ||||||| Sbjct 743986 TTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTTTTGC 743927 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||||| || ||||| ||||| Sbjct 743926 CAGTCAATGTTTTAACAAAAATTTGCAT 743899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483408768864840