Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1769 127 1e-24 >seq1769 Length=991018 Score = 127 bits (140), Expect = 1e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33520 TCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCG 33579 |||||||| | || | ||| || | || ||||| || || || ||||||||||| Sbjct 745952 TCACCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCA 745893 Query 33580 GAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGC 33639 ||| || | | || ||||| || || || |||||||||| |||||| |||||| | Sbjct 745892 CTGAGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGT 745833 Query 33640 GGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTC 33698 || | |||||||||||| |||||| |||| ||| |||| |||||| || | ||| Sbjct 745832 GGAATACCTTCTTTGTCCTGGATTTTCGCCTTCA-CATTGTCAATGGTGTCACTGGGTTC 745774 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||||||||| || || || || || ||||| ||||||||| Sbjct 745773 AACTTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATA 745722 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | | ||||| || || || |||||||| ||||||||||| Sbjct 745722 ACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACT 745663 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| | | || || || ||||| || |||||||||||||| |||||||| | || Sbjct 745662 GAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGG 745603 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || ||||| || | |||| ||| | ||||||||||| ||| | Sbjct 745602 AATGCCTTCTTTATCCTGGATTTT-TGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAA 745544 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || || || || ||||| ||||| |||||||| Sbjct 745543 CTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| ||| | | |||||||| || || ||||| || ||||||||||| Sbjct 744810 ACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACT 744751 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || || || || || || |||||||||| |||||| ||||| | || Sbjct 744750 GAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGG 744691 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || ||||| || | |||| ||| | ||||||||||| ||| | Sbjct 744690 AATGCCTTCTTTATCCTGGATTTT-TGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAA 744632 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || ||||| || ||||| ||||| |||||||| Sbjct 744631 CTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | | ||||| || || || || ||||| ||||||||||| Sbjct 745266 ACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACT 745207 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || ||||| || || || |||||||||||||| |||||||| | || Sbjct 745206 GAGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGG 745147 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || ||||| || | |||| ||| | |||||||||| ||| | Sbjct 745146 AATGCCTTCTTTATCCTGGATTTT-TGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAA 745088 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 745087 CTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCATA 745038 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | | ||||| || || || ||||| || ||||||||||| Sbjct 745038 ACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACT 744979 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| | | || || || ||||| || |||||||||||||| ||||||||| | || Sbjct 744978 GAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGG 744919 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || || || | | |||| || | |||||| || | ||| | Sbjct 744918 AATACCTTCCTTATCTTGGATCTT-GGCCTTGACATTATCAATGGTGTCACTGGGTTCAA 744860 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || ||||| || || || ||||| ||||| ||||||||| Sbjct 744859 CTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCATA 744810 Score = 105 bits (116), Expect = 4e-18 Identities = 170/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 744593 AAAATCTGCATGCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATG 744534 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| ||| || | | || || || ||||| || |||||||||| |||||| Sbjct 744533 TTGTAATCACTGAGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGT 744474 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||| ||||| || |||||| || || |||| || | ||| || Sbjct 744473 TGGTCTGGTGGAATACCCTCTTTATCTTGAATTTT-TGCTTTGACATTATCTATGGTATC 744415 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||| || || | ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 744414 ACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Query 33750 A 33750 | Sbjct 744354 A 744354 Score = 100 bits (110), Expect = 2e-16 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | ||| | | ||||| || || || || ||||| ||| Sbjct 745505 AAAATCTGCATGCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATG 745446 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| ||| || | | || || || || || || |||||||||| ||| ||| Sbjct 745445 TTGTAATCACTGAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGC 745386 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 ||||| | || | |||||||| || ||||| || | |||| ||| | ||||| Sbjct 745385 TGATCAGGAGGAATGCCTTCTTTATCCTGGATTTT-TGCCTTCACATTGTCGATAGTGTC 745327 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||| || || | || || || || || || || ||||| ||||| |||||||| Sbjct 745326 GCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Query 33750 A 33750 | Sbjct 745266 A 745266 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| | | ||||| || || || || ||||| |||||||| || Sbjct 744354 ACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACT 744295 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | || ||||||||||| || |||||||| ||||| || |||||| | || Sbjct 744294 GAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGG 744235 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||||| |||| |||| ||| | ||||| |||| || | Sbjct 744234 AATACCTTCCTTATCTTGGATTTTGGCTTTC-ACATTGTCTATAGTGTCACTTGGCTCTA 744176 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || || || || || | ||||| || || |||||||| Sbjct 744175 CTTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328696023894720