Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1292 113 6e-19 seq692 113 6e-19 >seq1292 Length=7111 Score = 113 bits (124), Expect = 6e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||||||||| |||||||| ||||| || || |||| | ||| || Sbjct 2250 ATATACAAGGTGCTGAAGCAGGTTCACCCGGACAC-----GGGCATCAGCGGCAAAG-CC 2197 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 |||||||| ||||| || || ||||||||||| | || || |||| | |||| || | Sbjct 2196 ATGTCGATAATGAATTCATTCGTCAACGACATCTTTGAGCGAATCGCCGCCGAAGCTTCT 2137 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| || | || ||||||| | ||| ||| | | || |||||||| ||||| Sbjct 2136 CGCCTCGCCCACTACAACAAGAGATCCACCATCACTAGCAGAGAAATCCAGACGGCCGTC 2077 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || | ||| |||||| |||||| |||||||||| ||| ||||||| Sbjct 2076 AGGCTTCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 2025 >seq692 Length=2860329 Score = 113 bits (124), Expect = 6e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||||||||| |||||||| ||||| || || |||| | ||| || Sbjct 2672712 ATATACAAGGTGCTGAAGCAGGTTCACCCGGACAC-----GGGCATCAGCGGCAAAG-CC 2672659 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 |||||||| ||||| || || ||||||||||| | || || |||| | |||| || | Sbjct 2672658 ATGTCGATAATGAATTCATTCGTCAACGACATCTTTGAGCGAATCGCCGCCGAAGCTTCT 2672599 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| || | || ||||||| | ||| ||| | | || |||||||| ||||| Sbjct 2672598 CGCCTCGCCCACTACAACAAGAGATCCACCATCACTAGCAGAGAAATCCAGACGGCCGTC 2672539 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || | ||| |||||| |||||| |||||||||| ||| ||||||| Sbjct 2672538 AGGCTTCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 2672487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177619164390542