Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1769 116 3e-21 >seq1769 Length=991018 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | ||||| || | || |||||||| ||||||||||| Sbjct 745265 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 745206 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || |||| |||||| || ||||| ||||| || ||||| || | |||| Sbjct 745205 AGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGA 745146 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || || || ||| ||| ||| ||||| | | | | |||||||| | ||| || Sbjct 745145 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACT 745086 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || || ||||| ||||| ||||| |||||||| Sbjct 745085 TCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | ||||| || | || |||||||| ||||||||||| Sbjct 745493 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 745434 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || | |||||| || ||||| |||| || ||||| || | |||| Sbjct 745433 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGA 745374 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || || || ||| ||| ||| ||||| | | | | |||||||| | ||| || Sbjct 745373 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACT 745314 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || || ||||| ||||| ||||| |||||||| Sbjct 745313 TCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | ||||| || | || || ||||| ||||||||||| Sbjct 745721 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTG 745662 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || || | ||| ||||| ||||| ||||| || ||||| || | |||| Sbjct 745661 AGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGA 745602 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || || || ||| ||| ||| ||||| | | | | |||||||| | ||| || Sbjct 745601 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACT 745542 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || || ||||| ||||| ||||| |||||||| Sbjct 745541 TCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| | ||||| | || |||| |||||| || ||||| Sbjct 745913 TCCTTCTGGATGTTGTAATCACTGAGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAA 745854 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||| || || | |||| | || |||||| ||| || ||||| | | Sbjct 745853 ATCAGACGCTGTTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTCGCCTTCACATTG 745794 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | ||| || |||| ||||||||||| || ||||| || || ||| Sbjct 745793 TCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACA 745734 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 745733 AAAATCTGCAT 745723 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || || || | |||||||| | || || || || ||||||||||| Sbjct 744809 CCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTG 744750 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || | |||||| || ||||| |||| ||||| || || | |||| Sbjct 744749 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGA 744690 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || || || ||| ||| ||| ||||| | | | | |||||||| | ||| || Sbjct 744689 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACT 744630 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || || || || ||||| ||||| ||||| |||||||| Sbjct 744629 TCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| || | |||||||| | || |||||||| ||||||||||| Sbjct 743897 CCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTA 743838 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || | ||| || || ||||| ||||| || || || || | |||| Sbjct 743837 AGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGA 743778 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || |||||| ||| | | | | | ||||| || | || || Sbjct 743777 ATACCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACT 743718 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || ||||| || ||||| ||||| || || || ||||| Sbjct 743717 TCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | ||||| || | || || || || ||||||||||| Sbjct 745037 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTG 744978 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || || | ||| ||||| ||||| ||||| || ||||| || | |||| Sbjct 744977 AGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGA 744918 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || |||||| ||| | | | | | ||||| || | ||| || Sbjct 744917 ATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAACT 744858 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || || ||||| || ||||||||||| ||||| |||||||| Sbjct 744857 TCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || || | ||||| || | || |||||||| ||||||||||| Sbjct 744581 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 744522 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || | ||| ||||| ||||| |||| ||||| ||||| | ||| Sbjct 744521 AGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGA 744462 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||| || | | ||| |||||| || | | | | | || || || | ||| || Sbjct 744461 ATACCCTCTTTAT-CTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAAC 744403 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 744402 TTCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450782380874280