Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1769 129 6e-25 >seq1769 Length=991018 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| |||||||| || | | ||| | || || | ||| Sbjct 745242 GTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCCAACTG 745183 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||||||||| |||||||| || || ||||||||||| || || ||||| Sbjct 745182 CTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTT 745123 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | || || ||| | |||||| | ||| || ||||| ||||| || || || || Sbjct 745122 TGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGT 745063 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| ||||| Sbjct 745062 CAAGGTTTTGACAAAAATCTGCAT 745039 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGAGTCGTCGAGCTG 134569 || || || || ||||| ||||| ||||| || | ||| | | | | || || | ||| Sbjct 744101 TGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTACCA-TCCTCCAACTG 744043 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||||| | |||||||| || || || |||||||| ||||||||||| Sbjct 744042 CTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCTTTATCTTGAATTTT 743983 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | |||||| ||| | || || | ||| || || |||||||| ||||| || || Sbjct 743982 TGCTTTGACATTGTCAATGGTATCACTTGGTTCAACTTCCAGAGTAATTGTTTTGCCAGT 743923 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| ||||||||||| Sbjct 743922 CAATGTTTTAACAAAAATTTGCAT 743899 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| |||||||| || | | ||| | || || | ||| Sbjct 744558 GTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTG 744499 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || |||||||||| |||||| || || || || || || ||||| ||||||||||| Sbjct 744498 TTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCTTGAATTTT 744439 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | |||||| || | || || | ||| || ||||| || || ||||| || || Sbjct 744438 TGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTTTTGCCAGT 744379 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||||||||| Sbjct 744378 CAAGGTTTTGACAAAAATTTGCAT 744355 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| |||||||| || | | ||| | || || | ||| Sbjct 745470 GTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTG 745411 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||||| ||| |||||||| || || ||||||||||| || || ||||| Sbjct 745410 CTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTT 745351 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | || || ||| | |||||| | ||| || || || ||||| || || || || Sbjct 745350 TGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGT 745291 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| ||||| Sbjct 745290 CAAGGTTTTGACAAAAATCTGCAT 745267 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG-TGAGAGTCGTCGAGCTG 134569 || || || ||||||||||| |||||||| || | || ||| || | || || | ||| Sbjct 743873 TGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAGGGTTCTGCCA-TCCTCTAACTG 743815 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 |||||| ||||||||||| || || ||||| || || || ||||| || ||||| || || Sbjct 743814 TTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATCTT 743755 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||| | || || || || || || ||||| ||||| Sbjct 743754 GGCCTTGACATTGTCAATAGTGTCACTGGGCTCAACTTCCAGTGTTATTGTTTTTCCGGT 743695 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||||||||||||| Sbjct 743694 CAAGGTTTTTACGAAAATTTGCAT 743671 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||| ||||| |||||||| || | | || | || || | ||| Sbjct 745698 GTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTG 745639 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || |||||||||||||| |||||||| || || ||||||||||| || || ||||| Sbjct 745638 TTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTT 745579 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | || || ||| | |||||| | ||| || || || ||||| || || || || Sbjct 745578 TGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAATAGTCTTCCCAGT 745519 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| ||||| Sbjct 745518 CAAGGTTTTGACAAAAATCTGCAT 745495 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||| || || |||||||| || | | ||| | || || | ||| Sbjct 744785 TGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCTAACTGC 744726 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| |||||||||| |||||| ||||| || || ||||||||||| || || |||||| Sbjct 744725 TTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCCTGGATTTTT 744666 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | |||||| | ||| || ||||| ||||| || || || || Sbjct 744665 GCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAATAGTCTTCCCTGTC 744606 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || ||||| ||||| Sbjct 744605 AAGGTTTTGACAAAAATCTGCAT 744583 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGG-TGTGAGAGTCGTCGAGCT 134568 ||| || || ||||||||||| ||||||||||| | | || | || | || || | | Sbjct 744330 GTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCA-TCTTCCAATT 744272 Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628 ||||||| |||||||| ||||| || ||||| || || || ||||| || ||||| |||| Sbjct 744271 GTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGGATTT 744212 Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688 | ||| || ||| | ||||| | || || || | ||||| || || || | Sbjct 744211 TGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTACTTCCAATGTAATTGTCTTCCCAG 744152 Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713 | | ||||| |||||||| ||||| Sbjct 744151 TAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||| || || |||||||| || | | || | || || | ||| Sbjct 745014 GTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCTAACTG 744955 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || |||||||||||||| |||||||| || || || ||||| || ||||| || || Sbjct 744954 TTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTT 744895 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | ||||| | ||| || || || ||||| ||||| || || Sbjct 744894 GGCCTTGACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTTCCCAGT 744835 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || ||||| ||||| Sbjct 744834 CAAAGTTTTGACAAAAATCTGCAT 744811 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG-TGAGAGTCGTCGAGCTG 134569 || || || ||||| || || || |||||||| | | ||| || | || || ||||| Sbjct 743645 TGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCA-TCTTCCAGCTG 743587 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| |||||||| |||||||| ||||| || || || || ||||| |||||||| || Sbjct 743586 CTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGAATCTT 743527 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | ||| || || | | || || ||||| || | || || || || ||||| Sbjct 743526 GTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTCTTGCCGGT 743467 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||||||||| Sbjct 743466 AAGCGTCTTTACGAAAATTTGCAT 743443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505385821897320