Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1769 159 4e-34 >seq1769 Length=991018 Score = 159 bits (176), Expect = 4e-34 Identities = 182/243 (75%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || || || || ||| | || ||||| | || Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||||| ||||| |||||||| || || ||||| ||||| || Sbjct 745783 GACACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAA 745842 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| ||||| | || |||| | ||||| || || || Sbjct 745843 CAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAAC 745902 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||| |||||||| |||||||| || ||||| | || |||||||| || | ||||| Sbjct 745903 ATCCAGAAGGAATCAACTCTTCACCTTGTCTTAAGACTGCGCGGTGGTGAA-TAGAAAGT 745961 Query 27646 TTT 27648 ||| Sbjct 745962 TTT 745964 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||||||||||||||||||||| || | ||||| ||| | || Sbjct 743443 ATGCAAATTTTCGTAAAGACGCTTACCGGCAAGACTATCACCTTAGAGGTGGAGCCGAGT 743502 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| ||||| ||| |||| || ||||| ||||| ||||| || || || || || Sbjct 743503 GATTCCATTGAGAATGTGAAAAACAAGATTCAAGACAAAGAGGGTATCCCCCCGGATCAA 743562 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| ||||||||||||| ||||| || || |||| | ||||| ||||| ||| Sbjct 743563 CAGCGTTTAATTTTTGCTGGCAAGCAGCTGGAAGATGGCAGAACCCTCAGTGACTACAAT 743622 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||| || ||||| || |||||| | ||| Sbjct 743623 ATCCAGAAAGAATCTACACTTCATTTGGTC 743652 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || | || ||||| || || || || || ||||| | || Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | || || |||||||| || || ||||| ||||| |||||||| Sbjct 744415 GATACCATAGATAATGTCAAAGCAAAAATTCAAGATAAAGAGGGTATTCCACCAGACCAA 744474 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||||||||| || | || |||| | | ||||| || || || Sbjct 744475 CAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744534 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| || ||||| Sbjct 744535 ATCCAAAAGGAATCAACCCTTCA 744557 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || | || || ||||||||||| || || ||||| || | Sbjct 744583 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 744642 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||||| ||||| ||||| || || || |||||||| || || Sbjct 744643 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAA 744702 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| ||||| | || |||| | | ||||| || || || Sbjct 744703 CAGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744762 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 |||| || ||||| || |||||| Sbjct 744763 ATCCAGAAAGAATCAACACTTCAT 744786 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || | || || ||||||||||| || || ||||| || | Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| ||||| ||||| || || || |||||||| || ||| Sbjct 745327 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745386 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| ||||||||||| ||||| | || |||| | | ||||| || || || Sbjct 745387 CAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 745446 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| || ||||| Sbjct 745447 ATCCAAAAGGAATCAACCCTTCA 745469 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || | || || ||||||||||| || || ||||| || | Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| ||||| ||||| || || || |||||||| || ||| Sbjct 745099 GACACTATCGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745158 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | ||||||||||| ||||| | || |||| | | ||||| || || || Sbjct 745159 CAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAAC 745218 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| || ||||| Sbjct 745219 ATCCAAAAGGAATCAACCCTTCA 745241 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || | || || ||||||||||| || || ||||| || | Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||||| ||||| ||||| || || || |||||||| || ||| Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | |||||||||||||| || | || |||| | | || || || || || Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||| ||||| || ||||| Sbjct 745675 ATCCAAAAAGAATCAACCCTTCA 745697 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || ||||| || ||||| ||||| | || || ||| || || Sbjct 744127 ATGCAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGAGCCAAGT 744186 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| || ||||| || || ||||| || ||||| ||||| || Sbjct 744187 GACACTATAGACAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAA 744246 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| ||||||||||||| || ||| | || |||| | ||||| ||||| || Sbjct 744247 CAACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTACAAC 744306 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| || ||||| Sbjct 744307 ATCCAAAAGGAATCAACACTTCA 744329 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || ||||| || |||||||| || ||||| || || Sbjct 743899 ATGCAAATTTTTGTTAAAACATTGACTGGCAAAACAATTACTCTGGAAGTTGAACCAAGT 743958 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || || |||||||| || || || || ||||| ||||| ||| Sbjct 743959 GATACCATTGACAATGTCAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAG 744018 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||||||||| ||||| | ||||||| | | || | || || ||| Sbjct 744019 CAAAGACTGATTTTTGCTGGCAAGCAGTTGGAGGATGGTAGAACATTGAGTGATTACAAT 744078 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || |||||| | || | | || || ||||| Sbjct 744079 ATTCAGAAGGAGTCAACACTTCATTTGGTTCTCAGACTGCGTGGTGG 744125 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || | || || || || ||||| ||||| ||||| | || Sbjct 744811 ATGCAGATTTTTGTCAAAACTTTGACTGGGAAAACAATTACACTTGAAGTTGAACCCAGT 744870 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || || || || ||||| || ||||||||||| ||| Sbjct 744871 GACACCATTGATAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAG 744930 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | |||||||||||||| || | || |||| | | || || || || || Sbjct 744931 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 744990 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| || ||||| || ||||| Sbjct 744991 ATCCAGAAAGAATCAACCCTTCA 745013 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | ||||| || || || || || || |||||| | || Sbjct 743671 ATGCAAATTTTCGTAAAAACCTTGACCGGAAAAACAATAACACTGGAAGTTGAGCCCAGT 743730 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || || || || ||||| || ||||||||||| || Sbjct 743731 GACACTATTGACAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAA 743790 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | ||||||||||| || || | ||||||| | ||||| || || || Sbjct 743791 CAACGCTTGATTTTTGCTGGCAAACAGTTAGAGGATGGCAGAACCCTTAGTGATTACAAC 743850 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||||| || |||||| Sbjct 743851 ATCCAAAAGGAATCAACACTTCAT 743874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570296206399920