Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1769 93.3 3e-14 >seq1769 Length=991018 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || || |||||||| ||||| ||||| || |||| | ||||| Sbjct 744563 ACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACCATCTTCT 744504 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | |||||||| ||||| || | |||||||||||| || || | ||||| || ||| || Sbjct 744503 AACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTTATCT-TG 744445 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||||| ||| || || || || || | || ||||| | || || ||||| Sbjct 744444 AATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACTTCGAGTGTGATTGTTTT 744385 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| |||||||| ||||| Sbjct 744384 GCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || || |||||||| ||||| || || || |||| | ||||| Sbjct 744335 ACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCATCTTCC 744276 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | |||||| || ||||| |||||||| ||||| || || || | || ||||| ||| | Sbjct 744275 AATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGG 744216 Query 34618 ATCTTTTGTTTTAACGATAAA-ATTGTGTC--TTCGCTCTCCACTTCCACGGTTATCGTT 34674 || ||| | ||| || | || ||||| || ||||| ||||||| || || || Sbjct 744215 AT-TTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCT--ACTTCCAATGTAATTGTC 744159 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || | ||||| || |||||||||||| Sbjct 744158 TTCCCAGTAAGTGTTTTGACGAAAATCTGCATG 744126 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || || || || || ||||| ||||| ||||||| | ||||| Sbjct 745019 ACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACCATCTTCT 744960 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | |||||||| ||||| || ||||| || || || || || | || ||||| ||| | Sbjct 744959 AACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTTATCTTGG 744900 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | || || || ||| ||||| | || ||||| | || || ||||| Sbjct 744899 ATCTTG-GCCTTGACATTATCAATGGTGTCACTGGGTTCAACTTCAAGTGTAATTGTTTT 744841 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| |||||||||||||| Sbjct 744840 CCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314721962987903