Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1769 129 4e-25 >seq1769 Length=991018 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| || || || || || || || | ||||| || | | Sbjct 744127 ATGCAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGAGCCAAGT 744186 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | ||| | ||||| || || |||||| | || |||||||| Sbjct 744187 GACACTATAGACAATGTGAAAGC-CAAAATCCAAGATAAGGAAGGTATTCCACCAGATCA 744245 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| |||||||| ||||| ||||||||| ||||||| | | || | | || ||||| Sbjct 744246 ACAACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTACAA 744305 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || ||| | || || ||| | |||||||| || || Sbjct 744306 CATCCAAAAGGAATCAACACTTCACTTGGTTCTCAGGTTGCGTGGTGG 744353 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || ||||||||||||||| | |||||||| ||| Sbjct 745723 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGT 745782 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | ||||| |||||||||||| | || |||||||| Sbjct 745783 GACACCATTGACAATGTGAAGGC-GAAAATCCAGGACAAAGAAGGTATTCCACCAGATCA 745841 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| ||||| || ||||||| | | || | | |||||||| Sbjct 745842 ACAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAA 745901 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || | || | || ||||| |||| || || Sbjct 745902 CATCCAGAAGGAATCAACTCTTCACCTTGTCTTAAGACTGCGCGGTGG 745949 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||| | || || || || || || ||||||||||| | | Sbjct 744583 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 744642 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | |||||| || |||||||| | || || ||||| Sbjct 744643 GACACCATTGACAATGTGAAGGC-AAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 744701 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| ||||| || | ||||| | | || | | |||||||| Sbjct 744702 ACAGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAA 744761 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| || ||| | ||||| ||| | || |||||||| || Sbjct 744762 CATCCAGAAAGAATCAACACTTCATTTGGTTCTCAGATTGCGAGGTGG 744809 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| |||||| | || |||||||| || || || |||||||| ||| Sbjct 743671 ATGCAAATTTTCGTAAAAACCTTGACCGGAAAAACAATAACACTGGAAGTTGAGCCCAGT 743730 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || | | || || |||||| | || |||||||| Sbjct 743731 GACACTATTGACAATGTCAAGGCCAAGA-TCCAAGATAAGGAAGGTATTCCTCCAGATCA 743789 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || ||||| |||||||| | || || | | || | | |||||||| Sbjct 743790 ACAACGCTTGATTTTTGCTGGCAAACAGTTAGAGGATGGCAGAACCCTTAGTGATTACAA 743849 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || ||| | ||||| ||| | || || || || || Sbjct 743850 CATCCAAAAGGAATCAACACTTCATTTGGTTCTCAGATTACGTGGTGG 743897 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || |||||| | || || ||||| ||||| ||||||||||| ||| Sbjct 744355 ATGCAAATTTTTGTCAAAACCTTGACTGGCAAAACAATCACACTCGAAGTTGAACCCAGT 744414 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | ||| | ||||||| || ||||| ||| | || ||||| || Sbjct 744415 GATACCATAGATAATGTCAAAGC-AAAAATTCAAGATAAAGAGGGTATTCCACCAGACCA 744473 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| || ||||| | ||||| | | || | | |||||||| Sbjct 744474 ACAGCGTCTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACCCTCAGTGATTACAA 744533 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || || | || || ||| | || ||||| || || Sbjct 744534 CATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 744581 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||| | || || || || || || ||||||||||| | | Sbjct 745039 ATGCAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC 745098 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | |||||| || |||||||| | || || ||||| Sbjct 745099 GACACTATCGACAATGTGAAGGC-AAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 745157 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || ||||| ||||| || ||||||| | | || | | |||||||| Sbjct 745158 GCAACGTTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGTAGAACCCTCAGTGATTACAA 745217 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || || | || || ||| | || ||||| || || Sbjct 745218 CATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745265 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || || || || || || || ||||| | || || || | | Sbjct 743443 ATGCAAATTTTCGTAAAGACGCTTACCGGCAAGACTATCACCTTAGAGGTGGAGCCGAGT 743502 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || | |||| ||| | |||| | || ||| |||||||| ||| | || || ||||| Sbjct 743503 GATTCCATTGAGAATGTGAAAA-ACAAGATTCAAGACAAAGAGGGTATCCCCCCGGATCA 743561 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||||||||| ||||| ||||| || |||||||| | | || | | || ||||| Sbjct 743562 ACAGCGTTTAATTTTTGCTGGCAAGCAGCTGGAAGATGGCAGAACCCTCAGTGACTACAA 743621 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||| || ||| | ||||| || | || ||||| || || Sbjct 743622 TATCCAGAAAGAATCTACACTTCATTTGGTCCTCAGATTGCGTGGGGG 743669 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||| | || || || || || || || |||||||| | | Sbjct 745495 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745554 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | |||||| || |||||||| | || || ||||| Sbjct 745555 GACACCATTGACAATGTGAAGGC-AAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 745613 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || ||||| || ||||| | ||||| | | || | | |||||||| Sbjct 745614 GCAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAA 745673 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| || || | || || ||| | || ||||| || || Sbjct 745674 CATCCAAAAAGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745721 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||| | || || ||||| || || || |||||||| ||| Sbjct 744811 ATGCAGATTTTTGTCAAAACTTTGACTGGGAAAACAATTACACTTGAAGTTGAACCCAGT 744870 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | || || |||||| | || |||||||| Sbjct 744871 GACACCATTGATAATGTCAAGGCCAAGA-TCCAAGATAAGGAAGGTATTCCTCCAGATCA 744929 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || ||||| || ||||| | ||||| | | || | | |||||||| Sbjct 744930 GCAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAA 744989 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| || || | || || ||| | || ||||| || || Sbjct 744990 CATCCAGAAAGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745037 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || |||||| | || || || || || || || |||||||| | | Sbjct 745267 ATGCAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC 745326 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | |||||| || |||||||| | || || ||||| Sbjct 745327 GACACTATCGACAATGTGAAGGC-AAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCA 745385 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| | || ||||| ||||| || | ||||| | | || | | |||||||| Sbjct 745386 GCAACGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAA 745445 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || || || | || || ||| | || ||||| || || Sbjct 745446 CATCCAAAAGGAATCAACCCTTCACTTGGTTCTCAGATTGCGTGGTGG 745493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001398091428