Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1753 87.8 1e-12 >seq1753 Length=1027297 Score = 87.8 bits (96), Expect = 1e-12 Identities = 195/286 (68%), Gaps = 9/286 (3%) Strand=Plus/Plus Query 30019 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30078 ||| |||||||| || ||||| ||||| |||| ||||| || ||||| | || || || Sbjct 984240 ATGTCTCCACTGAAAGCCGTAAACCGGCCCCAAATCTCCTTCCTCCCTATCTTCAAACCC 984299 Query 30079 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30138 ||||||||||| ||| || ||||| |||||||| | || || || || | Sbjct 984300 TAATTTGTCCAAAAAAGTTCTACTGCCATTGGCATCCCAGATGTGGACTCCTTTGTCAGC 984359 Query 30139 GAGCTCTTTGGAG--TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 || ||| ||| || || || || | ||||| || || || || || || || Sbjct 984360 CAG--CTTGAGAGCATTAGTTGAACCAGCAATAAACCAAAGAAGTTCTTCGACTACACCC 984417 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA-ACTGTCCCTT--GAGGCCGTACCTC 30253 ||||| || || | ||||| || |||||||||| |||| || |||| | ||||| Sbjct 984418 TTCCAGAAAACTCGTTTGGTGGTTAGGAGGGGAATGGTGTCATTTCGAAGGCTGAACCTC 984477 Query 30254 GCCTGAGACCCAAACATGGA-CAAGACTCCCGTGCCTGTCCTGTCT 30298 ||| | ||||| || || | || ||||| || || |||||| Sbjct 984478 ATCTGTGTGCCAAATATTGATCGAG-TGCCCGTTCCAGTTCTGTCT 984522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406153344323026