Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1829 102 1e-16 >seq1829 Length=5883334 Score = 102 bits (112), Expect = 1e-16 Identities = 121/160 (76%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 48125 ATGTTTAAACATTAAACATGCAAAATCACAAT-GAAGACCTTCATCTCTACTAATTAATT 48183 || |||||| |||||||| ||| || ||| | | |||| |||||||||| || | | Sbjct 4218208 ATATTTAAATATTAAACA-GCAGCATATCAAGCGCATACCT-CATCTCTACTGATCAGCT 4218265 Query 48184 CGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGA 48243 | || || || ||||||||||| | ||||||||| || | ||||||||| | || | Sbjct 4218266 CATTGCTGAACGTTAGACCGGGCATCACTCCACGTTTCTTCAACCAAAATATAGATGCAA 4218325 Query 48244 AAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||||| ||||| || || ||||| || || |||||||| Sbjct 4218326 AAGATCCTGAAAAAAAGATTCCTTCGACAGCTGCAAATGC 4218365 Score = 100 bits (110), Expect = 4e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||||||||||||||| || || || || || | ||| || |||||||||||||| ||||| Sbjct 4211133 CATAACTCCCATTTTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTC 4211192 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATT 47929 || ||||||| ||||| |||||||||||||| Sbjct 4211193 TAAAGATATATGATCCATGAAATCAAATGGATT 4211225 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||| ||| |||||||| || ||||||||||||||||| || || || |||||||| | || Sbjct 4220056 CCAGATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAAAACATGTTTTACAA 4220115 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| || || | | ||| || ||||| || || || || || ||||| |||| Sbjct 4220116 AATGCTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTTAGACATATCAACTT 4220175 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 |||| | ||||| || || || || || | || || | |||| || || || || Sbjct 4220176 CTTCCGTCGTCCAGAAGGACGCTTCGGCCATCTTGTAAAACCTCCAGATGTCCTGGTGTT 4220235 Query 48703 GGATTGGGAAAATAACAAATCT 48724 || || ||||||||||| || Sbjct 4220236 TTATCGGAAAAATAACAAACCT 4220257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694651511430240