Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1769 98.7 2e-15 >seq1769 Length=991018 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | |||||| || ||||| || || || |||||||| || ||||| Sbjct 744116 AGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTCAATGTTCTA 744057 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || | || || || || || || || ||||| || | | || ||||| Sbjct 744056 CCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGAATACCTTCT 743997 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGA 152063 || |||||||||||| ||||||| | || | | | || ||| || ||||| ||| Sbjct 743996 TTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATC---ACTTGGTTCAACTTCCAGA 743940 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||| || | || || || || | ||||| Sbjct 743939 GTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||||| || || || ||||||||||||||||| | ||||| || Sbjct 744570 TCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTGAGGGTTCTACC 744511 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || || || || | ||| ||||| | | || || || || Sbjct 744510 ATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGAATACCCTCTTT 744451 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGT 152065 |||||||||||| ||||||| | |||| | | || ||| || ||||| || || Sbjct 744450 ATCTTGAATTTTTGCTTTGACATTATCTATGGTATC---ACTGGGTTCAACTTCGAGTGT 744394 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || | || || || || | ||||| Sbjct 744393 GATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||||| || || ||||| |||||||||||||| | ||||| || Sbjct 745026 TCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACTGAGTGTTCTACC 744967 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || || || | | ||||| || | | || |||||||| Sbjct 744966 ATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCCTT 744907 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGT 152065 ||||| || || |||||| | || | | |||| ||| || |||||||| || Sbjct 744906 ATCTTGGATCTTGGCCTTGACATTATCAATGGTGTC---ACTGGGTTCAACTTCAAGTGT 744850 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| ||||| || || | ||| || || || | |||||| Sbjct 744849 AATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 84.2 bits (92), Expect = 5e-11 Identities = 155/221 (70%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCC 151947 |||||| || | |||||| || || || ||||||||||||||||| |||| ||||| | Sbjct 743886 TCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATC-ACTAAGGGTTCTGC 743828 Query 151948 CATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||| |||| ||| || || || || |||| | || || || | | || |||||| Sbjct 743827 CATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGT-TGTTGATCTGGAGGAATACCTTCC 743769 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGA 152063 || ||||| || || |||||| | || | |||| ||| ||| ||||| || Sbjct 743768 TTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTC---ACTGGGCTCAACTTCCAGT 743712 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | || || ||||| | ||||| Sbjct 743711 GTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 ||||| || | ||||| || || || |||||||||||||| || | ||||| ||| Sbjct 744341 CTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCA 744282 Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||||| | ||| || || || || | | || || || | | || |||||||| Sbjct 744281 TCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTA 744222 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTA 152066 ||||| ||||| ||| ||| | |||| |||| ||| ||||||||| | ||| Sbjct 744221 TCTTGGATTTTGGCTTTCACATTGTCTATAGTGTC---ACTTGGCTCTACTTCCAATGTA 744165 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || || || ||||| | |||||| Sbjct 744164 ATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | |||||| || || ||||| |||||||||||||| | ||||| || Sbjct 744798 TCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACTGAGGGTTCTACC 744739 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| || || || || || || | ||| || || | | || ||||| || Sbjct 744738 ATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTT 744679 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || |||||| || ||| | || | | |||| || ||||| || ||||| Sbjct 744678 ATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCGAGTGTAAT 744619 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || | || || || || | |||||| Sbjct 744618 AGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 84.2 bits (92), Expect = 5e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||||| || || |||||||||||||||||||| | ||||| || Sbjct 745710 TCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACTGAGTGTTCTACC 745651 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || || || | | ||||| || | | || ||||| || Sbjct 745650 ATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGGAATGCCTTCTTT 745591 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || |||||| || ||| | || | | |||| || ||||| || ||||| Sbjct 745590 ATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAACTTCTAGTGTAAT 745531 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || | || || || || | |||||| Sbjct 745530 AGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153791366391961