Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1769 145 2e-29 seq1748 93.3 9e-14 seq1526 93.3 9e-14 seq1054 93.3 9e-14 seq1020 93.3 9e-14 seq933 93.3 9e-14 >seq1769 Length=991018 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| | | || |||| ||| | || ||| |||||||||||||| ||| Sbjct 743898 ACCACCACGTAATCTGAGAACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACT 743839 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||||||||||| ||||| || ||||| ||||| |||||||| || || Sbjct 743838 AAGGGTTCTGCCATCCTCTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGG 743779 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||| ||||||||||| || || || | || |||||||| | || || Sbjct 743778 AATACCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATAGTGTCACTGGGCTCAAC 743719 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || || || || ||||| || || ||||| || ||||| Sbjct 743718 TTCCAGTGTTATTGTTTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | || |||| || | || |||||| ||||||||||| ||| Sbjct 745038 ACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCACT 744979 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||| ||||| || ||||| ||||||||||| || || || Sbjct 744978 GAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGG 744919 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||| ||||||||||| || || || |||| || ||||| | ||| || Sbjct 744918 AATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTCAAC 744859 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || || || || |||||||| || || || |||||||| Sbjct 744858 TTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | || |||| || | || ||| |||||||||||||||||| Sbjct 744354 ACCACCACGCAACCTGAGAACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACT 744295 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||| || | |||||| || ||||| || ||||||||||| || || Sbjct 744294 GAGGGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGG 744235 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||| |||||||| || ||||| || | || |||||||| | || || Sbjct 744234 AATACCTTCCTTATCTTGGATTTTGGCTTTCACATTGTCTATAGTGTCACTTGGCTCTAC 744175 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || || | || || ||||| |||||||| Sbjct 744174 TTCCAATGTAATTGTCTTCCCAGTAAGTGTTTTGACGAAAATCTGCAT 744127 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||| | || |||| || | || ||| |||||||||||||| ||| Sbjct 744581 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 744522 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| |||| ||||| || ||||| |||| ||| |||||||| ||| Sbjct 744521 AGGGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAGACGCTGTTGGTCTGGTGGA 744462 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||| || ||||| || |||||||| || |||| || || || | ||| ||| Sbjct 744461 ATACCCTCTTTATCTTGAATTTTTGCTTTGACATTATCTATGGTATCACTGGGTTCAACT 744402 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || || ||||| || || || || || ||||| Sbjct 744401 TCGAGTGTGATTGTTTTGCCAGTCAAGGTTTTGACAAAAATTTGCAT 744355 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | || |||| || | || ||| |||||||||||||| ||| Sbjct 745266 ACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACT 745207 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| || | || || || ||||| ||||||||||| || ||| || Sbjct 745206 GAGGGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCAGGAGG 745147 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || || || ||||| ||||| || || | ||||||||||| | ||| || Sbjct 745146 AATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAAC 745087 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || || ||||| || ||||| || || || || |||||||| Sbjct 745086 TTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | || |||| || | || |||||||||||||||||| ||| Sbjct 745722 ACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATCACT 745663 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||| ||||| || ||||| ||||||||||| || ||| || Sbjct 745662 GAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGGAGG 745603 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || || || ||||| ||||| || || | || || ||||| | ||| || Sbjct 745602 AATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAAC 745543 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| || ||||| || || || || |||||||| Sbjct 745542 TTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745495 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||| | || |||| || | || ||| |||||||||||||| ||| Sbjct 745493 CCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATCACTG 745434 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| |||| || || || ||||| |||| |||||| || ||| ||| Sbjct 745433 AGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCAGGAGGA 745374 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || || ||||| ||||| || || | ||||||||||| | ||| ||| Sbjct 745373 ATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGTTCAACT 745314 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || ||||| || || || || |||||||| Sbjct 745313 TCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 123 bits (136), Expect = 5e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| |||| | || |||| ||| | || |||||| ||||||||||| ||| Sbjct 744810 ACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATCACT 744751 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| |||| || || || ||||| |||| ||| ||||| ||| || Sbjct 744750 GAGGGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCAGGAGG 744691 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || || || ||||| ||||| || || | || || ||||| | ||| || Sbjct 744690 AATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTCAAC 744631 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || || ||||| || ||||| || || || || |||||||| Sbjct 744630 TTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 744583 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| | | || || || | || ||| || ||||||||||| ||| Sbjct 745950 ACCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACT 745891 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||| || | || || || ||||| |||| ||| ||||| || || Sbjct 745890 GAGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGG 745831 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || ||||| ||||| || || || || | || || ||||| | ||| || Sbjct 745830 AATACCTTCTTTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTCACTGGGTTCAAC 745771 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||| || || ||||| ||||| || || |||||||| Sbjct 745770 TTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 745723 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| | || |||| ||| | || || || || || ||||| ||| Sbjct 744125 CCACCACGCAGTCTGAGAACCAAATGAAGTGTTGACTCCTTCTGAATATTGTAATCACTC 744066 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || | |||||||| | || || || ||||| |||| | ||| || || ||| Sbjct 744065 AATGTTCTACCATCCTCCAACTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGTGGA 744006 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || || ||||| || |||||||| || | || || || || | ||| ||| Sbjct 744005 ATACCTTCTTTATCTTGAATTTTTGCTTTGACATTGTCAATGGTATCACTTGGTTCAACT 743946 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || || || ||||| || ||||| || || ||||| Sbjct 743945 TCCAGAGTAATTGTTTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 743899 >seq1748 Length=1038726 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 62929 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 62987 >seq1526 Length=1503564 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 13098 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 13040 >seq1054 Length=2124587 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 832376 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 832434 >seq1020 Length=2255758 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 1623721 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 1623663 >seq933 Length=2349635 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 183673 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 183615 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 186439 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 186381 Score = 93.3 bits (102), Expect = 9e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 359756 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 359698 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct 184300 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTTCCCGA 184242 Score = 84.2 bits (92), Expect = 5e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||| || |||||||| ||||||||||| ||||||||||||| |||||||||| Sbjct 187619 TTAGTATAGTAGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTAAATTCCCCGA 187677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046712498010114