Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1829 98.7 1e-15 >seq1829 Length=5883334 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/140 (77%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 23160 TTAAAAATCTTCATCTAAAGTGAATTTCACTGCTTTATCACTATTC--ATAACACCCATT 23217 |||||||||| |||| |||||| ||| | ||| || ||| ||||| |||||| Sbjct 4211088 TTAAAAATCTGCATCAGTTTTGAATT-CAC-GTTTTGCTTCTGTTCCCATAACTCCCATT 4211145 Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 || || || || ||||| | | |||| |||||||| || ||||| ||||| ||||||| Sbjct 4211146 TTCTGGTACTCTCCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTCTAAAGATATATGA 4211205 Query 23278 TCCATAAAATCAAATGGATT 23297 ||||| |||||||||||||| Sbjct 4211206 TCCATGAAATCAAATGGATT 4211225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 23881 AAAAATCTTT-TAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAG 23939 |||||| || || | | |||||| || ||||| |||||||||||||||||||| || | Sbjct 4220042 AAAAATGTTACTAACCAGATTTTCATTTACAATCCCATCACTAGCAGCAAAGAAGGCCAA 4220101 Query 23940 AACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTT 23999 ||||| ||||| |||||| | |||||| | || || |||||||| || || || Sbjct 4220102 AACATGTTTTACAAAATGCTTCTCATCATTATTCAACTTGTTCCAATCCGCCATGTCCTT 4220161 Query 24000 TGATAAATCAACTTCATC 24017 || | ||||||||| || Sbjct 4220162 AGACATATCAACTTCTTC 4220179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521475021467400