Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1769 120 2e-22 >seq1769 Length=991018 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | |||||| || || |||||||| || ||||| |||||||||||||| | Sbjct 745949 CCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTG 745890 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || | || |||| |||||| || ||||| |||| |||||| ||||||| | Sbjct 745889 AG--GGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTG 745832 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | |||||| || ||| || ||| ||||| | | |||||||| || ||| | Sbjct 745831 GAATACCTTCTTTGTCCTGGATTTTCGCCTTCACATTGTCAATGGTGTCACTGGGTTCAA 745772 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||| || ||||| ||||| || | |||||| || || || ||||| Sbjct 745771 CTTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 745723 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || ||| | |||| |||||| || |||||||||||||||||||| Sbjct 745269 CATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATC 745210 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 ||| || || | || |||| |||||| || ||||| |||||||| |||||||| Sbjct 745209 ACTGAG--GGTTCTACCATCTTCCAACTGCTTGCCAGCAAAAATCAAACGTTGCTGATCA 745152 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||| || ||| || || ||||| | | || |||||| | | Sbjct 745151 GGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGT 745092 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || || | ||| || || || || ||||| Sbjct 745091 TCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCAT 745039 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || ||| | |||| |||||| || || ||||||||||||||||| Sbjct 745725 CATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTTTGGATGTTGTAATC 745666 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||| | | || || | ||| || || ||||| |||||||| |||||||| | Sbjct 745665 ACTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCAGG 745606 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||| || ||| || || ||||| | | ||||||||| | ||| Sbjct 745605 AGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGTTC 745546 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||||| ||||| || || | ||| || || || || |||||| Sbjct 745545 AACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCATG 745494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || ||| | |||| |||||| || |||||||||||||||||||| Sbjct 745497 CATGCCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAATC 745438 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 ||| || || | || || | |||||| || ||||| |||| ||| |||||||| Sbjct 745437 ACTGAG--GGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGTTGCTGATCA 745380 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||| || ||| || || ||||| | | || |||||| | | Sbjct 745379 GGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCGATAGTGTCGCTTGGT 745320 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || || | ||| || || || || ||||| Sbjct 745319 TCAACTTCTAGTGTAATAGTCTTCCCAGTCAAGGTTTTGACAAAAATCTGCAT 745267 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || ||| | |||| ||||| || || || |||||||||||||| Sbjct 744813 CATACCACCTCGCAATCTGAGAACCAAATGAAGTGTTGATTCTTTCTGGATGTTGTAATC 744754 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 ||| || || | || || | |||||| || ||||| |||| |||||| ||||| Sbjct 744753 ACTGAG--GGTTCTACCATCTTCTAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCA 744696 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||| || ||| || || ||||| | | ||||||||| | | Sbjct 744695 GGAGGAATGCCTTCTTTATCCTGGATTTTTGCCTTCACATTGTCAATGGTGTCGCTTGGT 744636 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || | ||||| ||||| || || | ||| || || || || |||||| Sbjct 744635 TCAACTTCGAGTGTAATAGTCTTCCCTGTCAAGGTTTTGACAAAAATCTGCATG 744582 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || ||| | |||| |||||| || || || |||||||||||||| Sbjct 745041 CATACCACCACGCAATCTGAGAACCAAGTGAAGGGTTGATTCTTTCTGGATGTTGTAATC 744982 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||| | | || || | ||| || || ||||| |||||||| |||||||||| Sbjct 744981 ACTGAGTGTTCTACCATCTTCTAACTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGG 744922 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||||||| || ||||| ||| | | | |||||||| || ||| Sbjct 744921 AGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCACTGGGTTC 744862 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || || || || | || || || || || ||||| Sbjct 744861 AACTTCAAGTGTAATTGTTTTCCCAGTCAAAGTTTTGACAAAAATCTGCAT 744811 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186 |||| ||||| || |||||||||||||||||||| || || || | || | Sbjct 743879 ACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAATCACTAAG--GGTTCTGCCATCCT 743822 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | | ||| || || ||||| ||||| || || ||||||| ||| | ||||||||| || Sbjct 743821 CTAACTGTTTGCCAGCAAAAATCAAGCGTTGTTGATCTGGAGGAATACCTTCCTTATCTT 743762 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | || ||||| || || || |||| || || || Sbjct 743761 GGATCTTGGCCTTGACATTGT--CAATAGTGTCACTGGGCTCAACTTCCAGTGTTATTGT 743704 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || | ||| || ||||| |||||||| Sbjct 743703 TTTTCCGGTCAAGGTTTTTACGAAAATTTGCAT 743671 Score = 82.4 bits (90), Expect = 5e-11 Identities = 161/236 (68%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| ||||| | || ||| | |||| ||||| || || || ||||| ||||| Sbjct 743676 TTGCATACCCCCACGCAATCTGAGGACCAAATGAAGTGTAGATTCTTTCTGGATATTGTA 743617 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 || ||| || || | || ||||||||||| || ||||| || |||||||| ||| Sbjct 743616 GTCACTGAG--GGTTCTGCCATCTTCCAGCTGCTTGCCAGCAAAAATTAAACGCTGTTGA 743559 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 || | || | ||| || || || ||||| | |||| | | |||| || Sbjct 743558 TCCGGGGGGATACCCTCTTTGTCTTGAATCTTGTTTTTCACATTCTCAATGGAATCACTC 743499 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||| | || || ||||| || || || ||||| ||||| |||||||| Sbjct 743498 GGCTCCACCTCTAAGGTGATAGTCTTGCCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186 |||| |||||| || ||||||||||||||||| || ||| || || | || | Sbjct 744335 ACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTGAG--GGTTCTGCCATCTT 744278 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| || || || ||||| || ||||| || ||||||| || | ||||||||| || Sbjct 744277 CCAATTGTTTGCCAGCAAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCCTTATCTT 744218 Query 44247 TTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 || || |||| || ||| |||| ||||| | || || |||| ||||| | Sbjct 744217 GGAT-TTTGGCTTTCACATTGT--CTATAGTGTCACTTGGCTCTACTTCCAATGTAATTG 744161 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || || || || ||||| || |||||| Sbjct 744160 TCTTCCCAGTAAGTGTTTTGACGAAAATCTGCATG 744126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359981664720447