Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1769 125 2e-23 >seq1769 Length=991018 Score = 125 bits (138), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 ||||||||||| ||||| | || |||||||| || || || || || | ||| || | Sbjct 743674 CAAATTTTCGTAAAAACCTTGACCGGAAAAACAATAACACTGGAAGTTG--AGCCCAGTG 743731 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| || || || ||||| ||||| || || || ||||| || ||||| || || | Sbjct 743732 ACACTATTGACAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAAC 743791 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| | || || || || |||||| | || ||||| || || ||| ||||| ||| Sbjct 743792 AACGCTTGATTTTTGCTGGCAAACAGTTAGAGGATGGCAGAACCCTTAGTGATTACAACA 743851 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||||||| ||||||||||| ||| | ||| | ||| Sbjct 743852 TCCAAAAGGAATCAACACTTCATTTGGTTCTCAGA 743886 Score = 122 bits (134), Expect = 2e-22 Identities = 150/203 (74%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 ||||||||||| || || || || || || || |||||| | ||||||| ||| | | Sbjct 743446 CAAATTTTCGTAAAGACGCTTACCGGCAAGACTATCACCTTAGAGGTGG--AGCCGAGTG 743503 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | |||| ||||| || ||| | |||||||| |||||||| || ||||| ||||| || | Sbjct 743504 ATTCCATTGAGAATGTGAAAAACAAGATTCAAGACAAAGAGGGTATCCCCCCGGATCAAC 743563 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | || || || || || ||||| |||||||| || || || || || || Sbjct 743564 AGCGTTTAATTTTTGCTGGCAAGCAGCTGGAAGATGGCAGAACCCTCAGTGACTACAATA 743623 Query 178102 TCCAAAAAGAATCAACACTGCAT 178124 |||| |||||||| ||||| ||| Sbjct 743624 TCCAGAAAGAATCTACACTTCAT 743646 Score = 120 bits (132), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || ||||| || ||||| | ||||| || || || || ||||| || ||| ||| Sbjct 744586 CAGATTTTTGTCAAAACCTTGACAGGGAAGACTATTACACTCGAAGTTGAACCAAGC--- 744642 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| || || || || ||| || ||||| |||||||| || ||||| || || Sbjct 744643 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAA 744702 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || || || || || ||| | |||||||| || || || ||||| ||| Sbjct 744703 CAGCGTCTGATTTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACCCTCAGTGATTACAAC 744762 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 |||| |||||||||||||| ||| | ||| | ||| Sbjct 744763 ATCCAGAAAGAATCAACACTTCATTTGGTTCTCAGA 744798 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||| | || || ||||| || || || || || ||| | ||| Sbjct 744814 CAGATTTTTGTCAAAACTTTGACTGGGAAAACAATTACACTTGAAGTTGAACCCAGTGAC 744873 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| || || || ||||| || ||||| || |||||| Sbjct 744874 ACCATTGATAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAGCAA 744933 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || |||||| | |||||||| || || || ||||| ||| || Sbjct 744934 CGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAACATC 744993 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || ||||||||||| || || |||| || Sbjct 744994 CAGAAAGAATCAACCCTTCA-CTTGGTT 745020 Score = 118 bits (130), Expect = 3e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || |||||||||||||| | || || ||| | ||| Sbjct 745726 CAGATTTTTGTCAAGACCTTGACTGGAAAAACGATCACTTTGGAAGTTGAACCCAGTGAC 745785 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || || || |||||||||||||| || || || || || || Sbjct 745786 ACCATTGACAATGTGAAGGCGAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAACAG 745845 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||| | |||||||| || || || ||||| ||| || Sbjct 745846 CGTCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGCAGAACCCTCAGTGATTACAACATC 745905 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || |||||||| || || ||||| || ||||| Sbjct 745906 CAGAAGGAATCAACTCTTCACCTTGTCTTAAGACT 745940 Score = 116 bits (128), Expect = 9e-21 Identities = 154/211 (73%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || ||||| || ||||| | || || || || || || || || || ||| ||| Sbjct 745498 CAGATTTTTGTCAAAACCTTGACTGGGAAGACTATTACACTAGAAGTTGAACCAAGC--- 745554 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| || || || || ||| || ||||| |||||||| || ||||| || ||| Sbjct 745555 GACACCATTGACAATGTGAAGGCAAAAATCCAGGATAAAGAAGGCATTCCTCCTGATCAG 745614 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 ||||| | || || || || |||||| | |||||||| || || || ||||| ||| Sbjct 745615 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGTAGAACACTCAGTGATTACAAC 745674 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 |||||||||||||||| || || |||| || Sbjct 745675 ATCCAAAAAGAATCAACCCTTCA-CTTGGTT 745704 Score = 86.0 bits (94), Expect = 2e-11 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || |||||||| ||||| || || || || || || || | || || || || || Sbjct 744130 CAGATTTTCGTCAAAACACTTACTGGGAAGACAATTACATTGGAAGTAGA--GCCAAGTG 744187 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| || || || || ||| || || || || || ||||| || || || || || | Sbjct 744188 ACACTATAGACAATGTGAAAGCCAAAATCCAAGATAAGGAAGGTATTCCACCAGATCAAC 744247 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 |||| | || || || || ||||| | |||||||| || || || || || ||| Sbjct 744248 AACGTTTAATTTTTGCTGGCAAACAATTGGAAGATGGCAGAACCCTCAGTGACTACAACA 744307 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||| ||||||||||| || |||| || Sbjct 744308 TCCAAAAGGAATCAACACTTCA-CTTGGTT 744336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203700493193254