Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helobdella_20robusta_20[refseq_20GCF_5F000326865.1_202012-12-20] 1,991 sequences; 235,376,169 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1769 98.7 9e-16 >seq1769 Length=991018 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || | ||| || || || || || |||||||| ||||| || || | Sbjct 745949 CCACCGCGCAGTCTTAAGACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAATCACTG 745890 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || | ||||||||| || || ||||| |||||||| || | ||| Sbjct 745889 AGGGTTCTGCCATCTTCCAACTGCTTGCCAGCAAAAATCAGACGCTGTTGATCTGGTGGA 745830 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814 | | || |||||| |||||| ||||| | | || | |||| || | || || Sbjct 745829 ATACCTTCTTTGTCCTGGATTTTCGCCTTCA-CATTGTCAATGGTGTCACTGGGTTCAAC 745771 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || |||||||| || |||| ||||| || ||||||||||| Sbjct 745770 TTCCAAAGTGATCGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCAT 745723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||| || || || ||||| || || ||||| |||||| | | || || Sbjct 743651 ACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAGTCACTGAGGGTTCTGCCATCTTCC 743592 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || | |||||||| |||| ||| | | ||| ||||| Sbjct 743591 AGCTGCTTGCCAGCAAAAATTAAACGCTGTTGATCCGGGGGGATACCCTCTTTGTCTTGA 743532 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || | |||| | | | || |||| ||||||||| | || || || || Sbjct 743531 ATCTTGTTTTTCACATTCTCAATGGAATCACTCGGCTCCACCTCTAAGGTGATAGTCTTG 743472 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||||||||||||||| ||||| Sbjct 743471 CCGGTAAGCGTCTTTACGAAAATTTGCAT 743443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462292494409200