Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2421 111 2e-19 >seq2421 Length=99546 Score = 111 bits (122), Expect = 2e-19 Identities = 208/299 (70%), Gaps = 15/299 (5%) Strand=Plus/Minus Query 16279 TTTCTTTAA-CCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATG 16337 ||| ||||| ||| ||||| || ||||| || || ||||| || || || || || | | Sbjct 31726 TTTTTTTAAGCCAAAATATAGCTGCAAAAGATCCTGAAAAAAAAATTCCTTCCACTGCAG 31667 Query 16338 CAAAAGCGATTAATCGTTCCGCGTACGTAGCA---TCTTTATTACGAATCCATTTCTGTA 16394 |||| || | | ||||| | | | | |||| ||||| ||| |||||||| || Sbjct 31666 CAAATGCAACAACACGTTCAGAGAAAGAAGCACAATCTTTGTTA---ATCCATTTTAGTG 31610 Query 16395 CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA-TTTCTCT 16453 |||| | ||||||| || | ||| ||| ||||| || || ||||| || ||| || Sbjct 31609 CCCAAACTGCTTTTTTTTGAACACAGGGCATGGTTTCAATTGCATTAAATAAATTTGACT 31550 Query 16454 TTTTCCTGAAT---ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGT 16510 ||| || || ||| | || |||||||| |||||| |||||||||||||| Sbjct 31549 TTT--CT--ATCGGATCTTTAATGAGAGTATCAATGAGTAAAGAATACATTTCTGAGTGG 31494 Query 16511 ATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 ||||| || || || || ||||| ||||| || || || || | || ||| ||||| Sbjct 31493 ATGTTTTCAATTGCAATTTGAAACCCATAAAATGCTCTTGCTTCTGGTAGTTGAACTTC 31435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511280690705120