Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4436 114 9e-21 >seq4436 Length=60862 Score = 114 bits (126), Expect = 9e-21 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 102115 TTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAG 102174 ||||||||||||| ||||| |||||| | || ||| || ||||| || | || || Sbjct 44225 TTTATCTAAAAATTCTCTAGTTCCATTAGAATTCCATATCTGCACACCCTTTTGTGCAAG 44166 Query 102175 CTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCA 102234 || | |||||||| || || |||||||| |||| ||||||||||||||| |||| Sbjct 44165 AATATTTCCATCAGTAGAACCACTAATAAACCATAACAACTCTTCAACAACACCTTTCCA 44106 Query 102235 AAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 |||||| | || || ||||||||||||||| Sbjct 44105 AAATACACGTTTGGTTGTTAAAAGTGGAAAT 44075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361159112101916