Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq24 181 2e-40 seq266 154 2e-32 seq12660 131 3e-25 seq2327 120 5e-22 seq4436 93.3 6e-14 seq9904 86.0 9e-12 >seq24 Length=448628 Score = 181 bits (200), Expect = 2e-40 Identities = 189/247 (77%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| |||| || || || || ||||| || ||| ||||| ||||| | | Sbjct 62387 ATGCAAATATTTGTAAAAACCCTTACTGGTAAAACCATCACTTTAGAGGTTGAACCTGCT 62446 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct 62447 GATACGATTGACAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 62506 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || |||||||| ||| || |||||||| || || ||| Sbjct 62507 CAGCGTTTAATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACATTAAGTGACTACAAT 62566 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| || | ||| | ||| | || ||| |||| ||||| ||| ||| Sbjct 62567 ATTCAAAAAGAATCCACCCTTCATCTTGTTCTTCGATTAAGAGGAGGTATGCAAATATTT 62626 Query 124778 ATAAAAA 124784 |||||| Sbjct 62627 GTAAAAA 62633 Score = 172 bits (190), Expect = 8e-38 Identities = 187/247 (76%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || || ||||| || || ||||| ||||| | | Sbjct 62159 ATGCAAATATTTGTGAAAACCCTTACTGGTAAAACCATCACGTTAGAGGTTGAACCTGCT 62218 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| ||||||||||| ||||||||||| ||||| |||||| Sbjct 62219 GATACGATTGACAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 62278 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || |||||||| ||| || |||||||| || || ||| Sbjct 62279 CAGCGTTTAATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACATTAAGTGACTACAAT 62338 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| || | ||| | ||| | || ||| |||| ||||| ||| ||| Sbjct 62339 ATTCAAAAAGAATCCACCCTTCATCTTGTTCTTCGATTAAGAGGAGGTATGCAAATATTT 62398 Query 124778 ATAAAAA 124784 |||||| Sbjct 62399 GTAAAAA 62405 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || || ||||| || || ||||| ||||| | | Sbjct 61931 ATGCAAATATTTGTGAAAACCCTTACTGGTAAAACCATCACGTTAGAGGTTGAACCTGCT 61990 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| ||||||||||| || |||||||| ||||| || ||| Sbjct 61991 GATACGATTGACAACGTAAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAA 62050 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || |||||||| ||| || |||||||| ||||| || Sbjct 62051 CAGCGTTTAATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACATTAAGTGATTACAAC 62110 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | ||| | ||| | || ||| |||| ||||| Sbjct 62111 ATTCAAAAAGAATCCACCCTTCATCTTGTTCTTCGATTAAGAGGAGGTAT 62160 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| |||| || || || || ||||| || ||| ||||| ||||| | | Sbjct 62615 ATGCAAATATTTGTAAAAACCCTTACTGGTAAAACCATCACTTTAGAGGTTGAACCTGCT 62674 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| ||||||||||| || |||||||| ||||| || || Sbjct 62675 GATACGATTGACAACGTAAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAG 62734 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || |||||||||||| | |||| | || || || Sbjct 62735 CAGCGTTTAATTTTTGCTGGTAAGCAATTAGAGGATGGGAGAACTCTCAGTGACTACAAC 62794 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 |||||||||||||| || | ||| | || | || || ||||||| Sbjct 62795 ATTCAAAAAGAATCTACCCTTCATCTTGTCCTTCGATTGAGAGGTGG 62841 Score = 93.3 bits (102), Expect = 6e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 |||||| || || ||||||||| | | || ||||| || || || ||||| ||| || | Sbjct 61804 AGGTATTCCGCCAGATCAACAACGTTTAATCTTTGCTGGCAAGCAGTTAGAAGATGGTAG 61863 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 ||||||| ||||| || |||||||||||||| || | ||| | ||| | || ||| | Sbjct 61864 AACATTAAGTGATTACAACATTCAAAAAGAATCCACCCTTCATCTTGTTCTTCGATTAAG 61923 Query 124760 AGGTGGTAT 124768 ||| ||||| Sbjct 61924 AGGAGGTAT 61932 >seq266 Length=263831 Score = 154 bits (170), Expect = 2e-32 Identities = 183/247 (74%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || |||| |||||||| || || | ||| ||||| | | Sbjct 46922 ATGCAAATATTTGTTAAAACTTTAACTGGCAAAACCATTACATTGGAGGTTGAACCTGCT 46863 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||| ||||| ||||||||||| ||||| |||||| Sbjct 46862 GATACTATTGACAATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAA 46803 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || ||||| ||||| ||| | |||| | |||||||| Sbjct 46802 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGCAGAACCCTGAGCGATTATAAC 46743 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 ||||||||||| ||||| | || | ||| | || || |||||||||| ||| |||| Sbjct 46742 ATTCAAAAAGAGTCAACCCTTCACCTTGTTCTTCGATTGAGAGGTGGTATGCAAATATTC 46683 Query 124778 ATAAAAA 124784 | |||| Sbjct 46682 GTTAAAA 46676 Score = 152 bits (168), Expect = 8e-32 Identities = 177/238 (74%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || |||| |||||||| || || | ||| | ||| | | Sbjct 46466 ATGCAAATATTTGTTAAAACTTTAACTGGCAAAACCATCACATTGGAGGTCGAACCTGCT 46407 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||| ||||| ||||||||||| ||||| |||||| Sbjct 46406 GATACTATTGACAATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 46347 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || ||||| ||||| ||| | ||||| | |||||||| Sbjct 46346 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGCAGAACACTGAGTGATTATAAC 46287 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||| || ||| | ||| | ||| | || ||| |||| || |||||||| Sbjct 46286 ATTCAAAAAGAGTCTACTCTCCATCTAGTTCTTCGATTAAGAGGGGG--ATAAAAATT 46231 Score = 149 bits (164), Expect = 9e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || |||| |||||||| || || | ||| ||||| | | Sbjct 47150 ATGCAAATATTTGTTAAAACTTTAACTGGCAAAACCATTACATTGGAGGTTGAACCTGCT 47091 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||| ||||| ||||||||||| ||||| |||||| Sbjct 47090 GATACTATTGACAATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAA 47031 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || ||||| ||||| ||| | |||| | |||||||| Sbjct 47030 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGCAGAACCCTGAGCGATTATAAC 46971 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| ||||| | || | ||| | || || |||||||||| Sbjct 46970 ATTCAAAAAGAGTCAACCCTTCACCTTGTTCTTCGATTGAGAGGTGGTAT 46921 Score = 140 bits (154), Expect = 5e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | || || |||| |||||||| || || | ||| | ||| | | Sbjct 46694 ATGCAAATATTCGTTAAAACTTTAACTGGCAAAACCATCACATTGGAGGTCGAACCTGCT 46635 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||| ||||| ||||||||||| ||||| |||||| Sbjct 46634 GATACTATTGACAATGTGAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 46575 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || ||||| ||||| ||| | |||| | |||||||| Sbjct 46574 CAACGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGCAGAACCCTGAGCGATTATAAC 46515 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| ||||| | || | ||| | || || |||||||||| Sbjct 46514 ATTCAAAAAGAGTCAACCCTTCACCTTGTTCTTCGATTGAGAGGTGGTAT 46465 Score = 84.2 bits (92), Expect = 3e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 |||||| ||||| || ||||| | | |||||||| || ||||| ||||| ||| | | Sbjct 47277 AGGTATCCCACCAGACCAACAGCGTTTGATTTTTGCTGGTAAACAGTTAGAAGATGGCAG 47218 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACG 124759 |||| | |||||||| ||||||||||| ||||| | || | ||| | || || | Sbjct 47217 AACACTGAGTGATTATAACATTCAAAAAGAGTCAACCCTTCACCTTGTTCTTCGATTGAG 47158 Query 124760 AGGTGGTAT 124768 ||||||||| Sbjct 47157 AGGTGGTAT 47149 >seq12660 Length=10627 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| |||||||| | || || || || || ||||| || || |||| ||||| | | Sbjct 9975 ATGAAAATATTTGTGAAAACCCTTACTGGTAAAACCATCACATTAGAAGTTGAACCTGCT 9916 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| || ||||| ||||||||||| ||||||||| | ||| || ||| Sbjct 9915 GATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTTTTTTACCAGACCAA 9856 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || ||||||| ||| | |||||||| | || ||| Sbjct 9855 CAGCGTTTAATTTTTGCTGGTAAGGAATTAGAAGATGATAGAACATTAAGTTACTACAAT 9796 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||| ||| | ||| | ||| | || ||| |||| ||||| Sbjct 9795 GTTCAAAAAGAATCTACTCTTCATCTTGTTCTTCGATTAAGAGGAGGTAT 9746 Score = 114 bits (126), Expect = 2e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || || ||||| || || |||| ||||| | Sbjct 9522 ATGCAAATATTTGTGAAAACCCTTACTGGTAAAACCATCACATTAGAAGTTGAACTTGCT 9463 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| || ||||| ||||||||| ||| ||||| | ||| || ||| Sbjct 9462 GATACAATTGAAAACGTAAAAGCTCGAATTCAAGACAAAAAAGGTTTTTTACCAGACCAA 9403 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || || ||||||| ||| | |||||||| | || ||| Sbjct 9402 CAGCGTTTAATTTTTGCTGGTAAGGAATTAGAAGATGATAGAACATTAAGTTACTACAAT 9343 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAA 124771 ||||||||||||| ||| | ||| | ||| | || ||| |||| |||| || Sbjct 9342 GTTCAAAAAGAATCTACTCTTCATCTTGTTCTTCGATTAAGAGGAAGTATGAA 9290 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| | |||||| | || || || || || ||||| || || ||||| ||||| | | Sbjct 9294 ATGAATATATTTGTGAAAACCCTTACTGGTAAAACCATCACGTTAGAGGTTGAACCTGCT 9235 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| || | ||| |||||||| || ||||||||| | |||| |||||| Sbjct 9234 GATACAATTGACAACGTGAAAGCTAAAATTCACGACAAAGAAGGTGTTCCACTAGATCAA 9175 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||||| || || | ||||| || |||| | || || ||| Sbjct 9174 CAAAGTTTGTTTTTTGCTGGTAAGGAGTTAGAAAATGAAAGAACTCTCAGTGACTACAAT 9115 Query 124719 ATTCAAAAAGAAT 124731 ||||||||| ||| Sbjct 9114 ATTCAAAAAAAAT 9102 >seq2327 Length=102395 Score = 120 bits (132), Expect = 5e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | ||| ||||||||||||||||||||||| ||||| || || Sbjct 35024 GATACAATCGAGAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAG 34965 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| ||||| || ||||| ||| | | |||||| |||||||| Sbjct 34964 CAACGACTTATCTTTGCTGGAAAGCAGTTAGAAGATGGAAGGACATTAAGTGATTATAAC 34905 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||||| || || || | ||| | |||||| | | |||||||| ||||| Sbjct 34904 ATTCAAAAGGAGTCTACACTTCATCTCGTTTTAAGACTCAGAGGTGGTGGCAAAAA 34849 >seq4436 Length=60862 Score = 93.3 bits (102), Expect = 6e-14 Identities = 133/186 (72%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatA 205677 |||||||| |||| | || || ||| | ||||| || |||| ||| ||| || Sbjct 44558 GGATTCCATGCTGACATAATCATTCTTCGATCATCAGGATTTGTTTTAATTGTATGAATT 44499 Query 205678 ATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTA 205737 || |||| ||| || |||| || || ||||||| | || | |||| |||||| Sbjct 44498 ATCTGTGCTAACTGGTCAATACCCTGCCCAGTATAATCAGCATGTTTGTCAACATATTTT 44439 Query 205738 GCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCA 205797 || ||||| |||||||| ||||||||||| | ||| |||||||| || ||| ||| | | Sbjct 44438 GCTCCAAAGTGACGCCACTGAAAACCATATATTGGTCCTAAATCTCCAACTTCTCTGTGA 44379 Query 205798 T-TAAA 205802 | |||| Sbjct 44378 TGTAAA 44373 >seq9904 Length=19871 Score = 86.0 bits (94), Expect = 9e-12 Identities = 244/352 (69%), Gaps = 45/352 (13%) Strand=Plus/Plus Query 228317 taattaaattaaatat-tagttcatgtaatataaaaaatactaattt-tataattaattt 228374 || |||| ||| ||| || || || || |||||| ||| |||||| ||||| ||||| Sbjct 3821 TAGTTAATTTATATAAATAATTAATTTA-TATAAATAAT--TAATTTATATAAATAATTA 3877 Query 228375 agataatttGAAAGAATTAGATATATCT-AGAAATT--TTAATATAAATATTTCATCATT 228431 | ||| | ||| ||||| || ||| | | |||| || ||||||||| || || || Sbjct 3878 ATTTAAAT--AAATAATTA-ATTTATATGATTAATTAATTTATATAAATAATTAAT--TT 3932 Query 228432 ACCAAAATCATTAATCAAATTAAATA-TTAGGACATGTTATATAAAAAATACTAATTTT- 228489 | |||| |||||| | ||||||| |||| ||||||||| ||| |||||| Sbjct 3933 ATATAAATAATTAATTTATTTAAATAATTAGT-----TTATATAAATAAT--TAATTTAT 3985 Query 228490 ----ATAATTAATTTAGATAATTTGAAAGAATTAGATATATCTAGAAATTTTAATATAAA 228545 |||||||||||| |||| | | | | ||| ||| || | ||||| ||||||| Sbjct 3986 ATAAATAATTAATTTATATAAATAGTTA-ATTTATATAAAT-AATTAATTT--ATATAAA 4041 Query 228546 TATTTCATCATTACCAAAATCATTGATTACATTAAATATTAATTCATGTTATATAAAACA 228605 || || || ||| ||| ||| || | |||| ||||| || ||||||||| Sbjct 4042 TAATTGAT--TTATATAAAAAATTAATCTAAATAAA---TAATTAAT-TTATATAAA--T 4093 Query 228606 CACTAATTT-TATAAA----TGATTTATATAATTTGAAGGAATTGGATATAT 228652 | |||||| |||||| | |||||||||| | || ||||| |||||| Sbjct 4094 AAATAATTTATATAAATAATTAATTTATATAAAT--AAATAATTGCATATAT 4143 Score = 86.0 bits (94), Expect = 9e-12 Identities = 222/314 (71%), Gaps = 37/314 (12%) Strand=Plus/Plus Query 228248 TAATTAATTTA---AAAGAATTGGATATATCTAAC-AATTA--TAATATAAATATTTCAT 228301 ||||||||||| ||| |||| || ||| ||| ||||| | | ||||||| || || Sbjct 3838 TAATTAATTTATATAAATAATTA-ATTTATATAAATAATTAATTTAAATAAATAATTAAT 3896 Query 228302 CATTACCaaaaacattaattaaattaaatat-tagttcatgtaatataaaaaatactaat 228360 ||| | ||||||||| ||| ||| || || || || |||||| ||| |||| Sbjct 3897 --TTAT----ATGATTAATTAATTTATATAAATAATTAATTTA-TATAAATAAT--TAAT 3947 Query 228361 tt-tataattaatttagataatttGAAAGAATTAGATATATCTAGA-AATT--TTAATAT 228416 || | ||| ||||| || | || | ||| ||||| || ||| || | |||| || |||| Sbjct 3948 TTATTTAAATAATT-AGTTTATAT-AAATAATTA-ATTTATATAAATAATTAATTTATAT 4004 Query 228417 AAATATTTCATCATTACCAAAATCATTAATCAAATTAAATATTAGGACATGTTATATAAA 228476 ||||| || || ||| |||| |||||| | |||||| | | || ||||||||| Sbjct 4005 AAATAGTTAAT--TTATATAAATAATTAATTTATATAAATAATTG---AT-TTATATAAA 4058 Query 228477 AAATA---CTAATTTTATAATTAATTTAGATAATTTGAAAGAATTAGATATATCTAGAAA 228533 |||| |||| | |||||||||||| |||| | ||| |||| ||||| || | Sbjct 4059 AAATTAATCTAAATAAATAATTAATTTATATAAAT--AAATAATT-TATATAAATAATTA 4115 Query 228534 TTTTAATATAAATA 228547 ||| ||||||||| Sbjct 4116 ATTT-ATATAAATA 4128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755258486028800