Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4436 96.9 3e-15 >seq4436 Length=60862 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 19987 GGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAA-CTTGAGAAATGAATT 20045 ||||||||||| | ||| ||||||| ||| |||| || ||| ||| | || Sbjct 44019 GGAACTGGAACACTTTCTATATTTGGTGGTCAAATGCGATTCAATCTTCGTGAATCATTT 44078 Query 20046 TCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTT 20105 | ||| ||||| || ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 44079 CCACTT-TTAACAACCAAACGTGTATTTTGGAAAGGTGTTGTTGAAGAGTTGTTATGGTT 44137 Query 20106 TATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGC 20165 ||||| || || || || | |||| | |||| || || |||| |||| | Sbjct 44138 TATTAGTGGTTCTACTGATGGAAATATTCTTGCACAAAAGGGTGTGCAGATATGGAATTC 44197 Query 20166 ACATGGATCTAAGCAATTTTTA 20187 ||||| ||| |||||||| Sbjct 44198 TAATGGAACTAGAGAATTTTTA 44219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399082242509620