Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq167 136 2e-27 >seq167 Length=297375 Score = 136 bits (150), Expect = 2e-27 Identities = 192/267 (72%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 3872 AAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATG 3931 |||||| |||||||| | |||||||| || || || || ||||| ||||| || ||||| Sbjct 33568 AAAGGTTTACATTTTGTTATGGCTGATGGAGGTTTTTCTGTTGAAGGTCAGGAGAATATT 33509 Query 3932 CAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGA-TCAT 3990 || || || ||||| ||| || | ||||| ||||| | | | ||| || || | | | Sbjct 33508 CAGGAGATATTATCCAAACAGCTTTATTTATGTCAGTTTCTTTGTGCTTT-ATCAGTTTT 33450 Query 3991 ACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGG 4050 | ||| |||||||||| | | |||| | || || | ||||| || |||||| ||| Sbjct 33449 AAGAAAAGGTGGTCATTTTATATGCAAAGTCTTTGACTTGTTTACTCCATTTAGTATTGG 33390 Query 4051 TTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATC 4110 | | || ||||| |||||| || ||||| ||| ||||||||||| || || | | Sbjct 33389 TCTTGTTTATTTAATGTATCGAGCTTTTGATCAAATTTGTATTTTTAAGCCTGTTACTAG 33330 Query 4111 GCGACCGGCCAATTCTGAAAGATATTT 4137 || || || ||||| ||| | ||||| Sbjct 33329 TCGTCCTGCTAATTCAGAACGTTATTT 33303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276483102684748