Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 6e-11 >seq24 Length=448628 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||||||||| | || || || |||||||| ||| || || |||||||||||||| Sbjct 62158 ACCTCCTCTTAATCGAAGAACAAGATGAAGGGTGGATTCTTTTTGAATGTTGTAATCACT 62099 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || | || || |||||||| || ||||| || | ||||| || || || Sbjct 62098 TAATGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATTAAACGCTGTTGGTCTGGTGG 62039 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGC 34078 | | || |||| | | | |||| |||| | ||| | |||||| || ||| Sbjct 62038 AATACCTTCCTTGT-CTTGAATTTTAGCTTTTACGTTGTCAATCGTATCAGCAGGTTCAA 61980 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | ||| || ||||| || || || ||||||||||| |||||||| Sbjct 61979 CCTCTAACGTGATGGTTTTACCAGTAAGGGTTTTCACAAATATTTGCAT 61931 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||||||||| | || || || |||||||| ||| || || ||||| ||||| || Sbjct 62386 ACCTCCTCTTAATCGAAGAACAAGATGAAGGGTGGATTCTTTTTGAATATTGTAGTCACT 62327 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || | || || |||||||| || ||||| || | ||||| ||||| || Sbjct 62326 TAATGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATTAAACGCTGTTGATCTGGTGG 62267 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGC 34078 | | |||||||| |||||| |||| | ||| | |||||| || ||| Sbjct 62266 AATACCTTCTTTGTCTTGAATTTTA-GCTTTTACGTTGTCAATCGTATCAGCAGGTTCAA 62208 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | ||| || ||||| || || || ||||||||||| |||||||| Sbjct 62207 CCTCTAACGTGATGGTTTTACCAGTAAGGGTTTTCACAAATATTTGCAT 62159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396961183334632