Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq347 84.2 3e-11 >seq347 Length=242888 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 153906 GCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACA 153965 |||||||| || ||||||| || ||| | | ||||||||||| ||||| || |||||| Sbjct 117535 GCACTACAAACACGAGAGCAACACATCCGACGTGACAAAGCAACTAGTAATATTTGCACA 117594 Query 153966 GCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCA 154019 ||||| || || || || || ||||||| | | ||| |||||||||| || Sbjct 117595 GCTCAAGCTCTTCTTGCCAACATGTCTGTTATGTTTGCCATATATCATGGTCCA 117648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579061364813440