Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq347 89.7 6e-13 >seq347 Length=242888 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 158581 GCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACA 158640 |||||||| || ||||||| || ||| || | ||||||||||| ||||| || |||||| Sbjct 117535 GCACTACAAACACGAGAGCAACACATCCGACGTGACAAAGCAACTAGTAATATTTGCACA 117594 Query 158641 GCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCA 158694 || ||||| || || || || ||||||| | | ||| |||||||||| || Sbjct 117595 GCTCAAGCTCTTCTTGCCAACATGTCTGTTATGTTTGCCATATATCATGGTCCA 117648 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 159593 TCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAA 159652 ||||| | || ||| |||| |||||| || |||||||||| ||||||||||||||||||| Sbjct 124934 TCAGAGAAATTTGTGAGATGGTTCATAAGCATGGTGGTCAAGTATATCTTGATGGTGCAA 124993 Query 159653 ATCTAAATGCACAGGT 159668 | | ||||||||||| Sbjct 124994 ACATGAATGCACAGGT 125009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587897454013760