Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2421 194 2e-44 >seq2421 Length=99546 Score = 194 bits (214), Expect = 2e-44 Identities = 221/295 (75%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 37251 CtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCT 37310 |||||||||| ||||||||| |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 31727 CTTTTTTTAAGCCAAAATATAGCTGCAAAAGATCCTGAAAAAAAAATTCCTTCCACTGCA 31668 Query 37311 GCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTC 37370 |||||||| |||| |||| | ||||| | || || | |||||||||| || | Sbjct 31667 GCAAATGCAACAACACGTTCAGAGAAAGAAGCACAATCTTTGTTAATCCATTTTAGTGCC 31608 Query 37371 CAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtt--tt 37428 ||| |||| ||| || |||||| || ||||||||||| || | | ||| || | Sbjct 31607 CAAACTGCTTTTTTTTGAACACAGGGCATGGTTTCAATTGCATT--AAATAAATTTGACT 31550 Query 37429 tttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATAT 37488 ||||| |||| | || ||||||||| |||||| ||||||||| ||||| || | Sbjct 31549 TTTCTATCGGATCTTTAATGAGAGTATCAATGAGTAAAGAATACATTTCTGAGTGGATGT 31490 Query 37489 TTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC 37543 ||||||| || || ||||| |||||||| || ||||| | || |||||| || Sbjct 31489 TTTCAATTGCAATTTGAAACCCATAAAATGCTCTTGCTTCTGGTAGTTGAACTTC 31435 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 || |||| ||| | ||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct 32217 ATGTTTATACATAAGACATGCAAAGTCACAATGTAAACCCTCATCTCTACTGATCAATTC 32158 Query 37220 ATTAGAAAAGGTTAATCCTGG 37240 ||| || || |||| ||| || Sbjct 32157 ATTTGAGAAAGTTACTCCAGG 32137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592161938772640