Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydra_20vulgaris_20[refseq_20GCF_5F000004095.1_202009-10-30] 20,916 sequences; 852,170,992 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3600 89.7 7e-13 >seq3600 Length=73391 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 47970 ACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGA 48029 ||| | ||||||| |||||| ||||| | ||| ||| ||| |||| || || || | Sbjct 10834 ACCTCTTCTTGGACTTTCATGGTTAAACAAAATTCCATTACTTGCATGCAAACCATAAGC 10893 Query 48030 TTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAA 48081 |||||||||||| |||| ||||| || ||||| ||||||||||| || ||| Sbjct 10894 TTCACGATAGTTTGTTACAATCCAATAACCATAAAGTTTTGCAACTCCTTAA 10945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665320406489120